Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.69□□□□□ -0.06
Otud1Q9CUB6 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Otud1Q9CUB6 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.69□□□□□ -0.06
Otud1Q9CUB6 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.69□□□□□ -0.06
Otud1Q9CUB6 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Otud1Q9CUB6 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Otud1Q9CUB6 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Otud1Q9CUB6 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.69□□□□□ -0.06
Otud1Q9CUB6 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.69□□□□□ -0.06
Otud1Q9CUB6 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.69□□□□□ -0.06
Otud1Q9CUB6 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Otud1Q9CUB6 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Otud1Q9CUB6 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Otud1Q9CUB6 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Otud1Q9CUB6 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.69□□□□□ -0.06
Otud1Q9CUB6 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.69□□□□□ -0.06
Otud1Q9CUB6 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Otud1Q9CUB6 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Otud1Q9CUB6 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Otud1Q9CUB6 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Otud1Q9CUB6 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Otud1Q9CUB6 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Otud1Q9CUB6 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Otud1Q9CUB6 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.69□□□□□ -0.06
Otud1Q9CUB6 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Otud1Q9CUB6 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Otud1Q9CUB6 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Otud1Q9CUB6 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Otud1Q9CUB6 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Otud1Q9CUB6 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Otud1Q9CUB6 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Otud1Q9CUB6 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.68□□□□□ -0.06
Otud1Q9CUB6 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Otud1Q9CUB6 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Otud1Q9CUB6 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Otud1Q9CUB6 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Otud1Q9CUB6 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Otud1Q9CUB6 Gm4899-201ENSMUST00000178708 719 ntBASIC14.68□□□□□ -0.06
Otud1Q9CUB6 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.68□□□□□ -0.06
Otud1Q9CUB6 Gm37153-201ENSMUST00000193637 231 ntBASIC14.68□□□□□ -0.06
Otud1Q9CUB6 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.68□□□□□ -0.06
Otud1Q9CUB6 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.68□□□□□ -0.06
Otud1Q9CUB6 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.68□□□□□ -0.06
Otud1Q9CUB6 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.68□□□□□ -0.06
Otud1Q9CUB6 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Otud1Q9CUB6 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Otud1Q9CUB6 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Otud1Q9CUB6 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Otud1Q9CUB6 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Otud1Q9CUB6 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Otud1Q9CUB6 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Otud1Q9CUB6 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.68□□□□□ -0.06
Otud1Q9CUB6 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Otud1Q9CUB6 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Otud1Q9CUB6 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Otud1Q9CUB6 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Otud1Q9CUB6 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Otud1Q9CUB6 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Otud1Q9CUB6 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Otud1Q9CUB6 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Otud1Q9CUB6 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Otud1Q9CUB6 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Otud1Q9CUB6 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Otud1Q9CUB6 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Otud1Q9CUB6 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Otud1Q9CUB6 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Otud1Q9CUB6 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Otud1Q9CUB6 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.67□□□□□ -0.06
Otud1Q9CUB6 Gm14140-201ENSMUST00000119999 995 ntBASIC14.67□□□□□ -0.06
Otud1Q9CUB6 Gm12260-201ENSMUST00000122447 411 ntBASIC14.67□□□□□ -0.06
Otud1Q9CUB6 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.67□□□□□ -0.06
Otud1Q9CUB6 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Otud1Q9CUB6 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Otud1Q9CUB6 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Otud1Q9CUB6 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.67□□□□□ -0.06
Otud1Q9CUB6 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Otud1Q9CUB6 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Otud1Q9CUB6 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Otud1Q9CUB6 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Otud1Q9CUB6 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.67□□□□□ -0.06
Otud1Q9CUB6 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Otud1Q9CUB6 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Otud1Q9CUB6 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Otud1Q9CUB6 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Otud1Q9CUB6 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.67□□□□□ -0.06
Otud1Q9CUB6 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Otud1Q9CUB6 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Otud1Q9CUB6 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.66□□□□□ -0.06
Otud1Q9CUB6 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Otud1Q9CUB6 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Otud1Q9CUB6 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Otud1Q9CUB6 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Otud1Q9CUB6 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Otud1Q9CUB6 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Otud1Q9CUB6 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.66□□□□□ -0.06
Otud1Q9CUB6 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Otud1Q9CUB6 Gm11779-201ENSMUST00000118541 368 ntBASIC14.66□□□□□ -0.06
Otud1Q9CUB6 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Otud1Q9CUB6 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
Otud1Q9CUB6 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms