Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cldnd1Q9CQX5 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cldnd1Q9CQX5 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cldnd1Q9CQX5 Gm8410-201ENSMUST00000117225 605 ntBASIC15.88■□□□□ 0.13
Cldnd1Q9CQX5 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.88■□□□□ 0.13
Cldnd1Q9CQX5 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cldnd1Q9CQX5 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cldnd1Q9CQX5 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cldnd1Q9CQX5 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cldnd1Q9CQX5 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cldnd1Q9CQX5 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cldnd1Q9CQX5 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cldnd1Q9CQX5 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Cldnd1Q9CQX5 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cldnd1Q9CQX5 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cldnd1Q9CQX5 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cldnd1Q9CQX5 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cldnd1Q9CQX5 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cldnd1Q9CQX5 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cldnd1Q9CQX5 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cldnd1Q9CQX5 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Cldnd1Q9CQX5 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cldnd1Q9CQX5 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.87■□□□□ 0.13
Cldnd1Q9CQX5 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cldnd1Q9CQX5 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cldnd1Q9CQX5 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Cldnd1Q9CQX5 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Cldnd1Q9CQX5 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cldnd1Q9CQX5 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cldnd1Q9CQX5 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cldnd1Q9CQX5 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cldnd1Q9CQX5 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cldnd1Q9CQX5 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.87■□□□□ 0.13
Cldnd1Q9CQX5 Gm10499-201ENSMUST00000174094 934 ntBASIC15.87■□□□□ 0.13
Cldnd1Q9CQX5 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cldnd1Q9CQX5 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cldnd1Q9CQX5 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cldnd1Q9CQX5 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cldnd1Q9CQX5 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.87■□□□□ 0.13
Cldnd1Q9CQX5 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cldnd1Q9CQX5 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cldnd1Q9CQX5 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.87■□□□□ 0.13
Cldnd1Q9CQX5 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.87■□□□□ 0.13
Cldnd1Q9CQX5 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Cldnd1Q9CQX5 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Cldnd1Q9CQX5 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cldnd1Q9CQX5 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Cldnd1Q9CQX5 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cldnd1Q9CQX5 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cldnd1Q9CQX5 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cldnd1Q9CQX5 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cldnd1Q9CQX5 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.86■□□□□ 0.13
Cldnd1Q9CQX5 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Cldnd1Q9CQX5 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cldnd1Q9CQX5 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cldnd1Q9CQX5 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cldnd1Q9CQX5 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cldnd1Q9CQX5 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cldnd1Q9CQX5 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cldnd1Q9CQX5 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.86■□□□□ 0.13
Cldnd1Q9CQX5 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Cldnd1Q9CQX5 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cldnd1Q9CQX5 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cldnd1Q9CQX5 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.86■□□□□ 0.13
Cldnd1Q9CQX5 Mir7684-201ENSMUST00000183858 60 ntBASIC15.86■□□□□ 0.13
Cldnd1Q9CQX5 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC15.86■□□□□ 0.13
Cldnd1Q9CQX5 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Cldnd1Q9CQX5 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Cldnd1Q9CQX5 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cldnd1Q9CQX5 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.86■□□□□ 0.13
Cldnd1Q9CQX5 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cldnd1Q9CQX5 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Cldnd1Q9CQX5 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cldnd1Q9CQX5 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cldnd1Q9CQX5 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.86■□□□□ 0.13
Cldnd1Q9CQX5 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cldnd1Q9CQX5 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.86■□□□□ 0.13
Cldnd1Q9CQX5 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cldnd1Q9CQX5 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cldnd1Q9CQX5 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
Cldnd1Q9CQX5 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cldnd1Q9CQX5 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cldnd1Q9CQX5 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cldnd1Q9CQX5 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.85■□□□□ 0.13
Cldnd1Q9CQX5 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cldnd1Q9CQX5 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Cldnd1Q9CQX5 Gm13453-201ENSMUST00000118708 357 ntBASIC15.85■□□□□ 0.13
Cldnd1Q9CQX5 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.85■□□□□ 0.13
Cldnd1Q9CQX5 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.85■□□□□ 0.13
Cldnd1Q9CQX5 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC15.85■□□□□ 0.13
Cldnd1Q9CQX5 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Cldnd1Q9CQX5 Gm9824-201ENSMUST00000178707 561 ntBASIC15.85■□□□□ 0.13
Cldnd1Q9CQX5 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Cldnd1Q9CQX5 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.85■□□□□ 0.13
Cldnd1Q9CQX5 Gm6888-201ENSMUST00000221983 706 ntBASIC15.85■□□□□ 0.13
Cldnd1Q9CQX5 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cldnd1Q9CQX5 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cldnd1Q9CQX5 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.85■□□□□ 0.13
Cldnd1Q9CQX5 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Cldnd1Q9CQX5 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms