Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retreg3Q9CQV4 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retreg3Q9CQV4 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retreg3Q9CQV4 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retreg3Q9CQV4 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retreg3Q9CQV4 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retreg3Q9CQV4 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retreg3Q9CQV4 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retreg3Q9CQV4 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retreg3Q9CQV4 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retreg3Q9CQV4 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.66■□□□□ 0.1
Retreg3Q9CQV4 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retreg3Q9CQV4 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retreg3Q9CQV4 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retreg3Q9CQV4 Gm4535-201ENSMUST00000182274 558 ntBASIC15.66■□□□□ 0.1
Retreg3Q9CQV4 Gm27646-201ENSMUST00000183989 110 ntBASIC15.66■□□□□ 0.1
Retreg3Q9CQV4 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.66■□□□□ 0.1
Retreg3Q9CQV4 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retreg3Q9CQV4 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.66■□□□□ 0.1
Retreg3Q9CQV4 AC106830.1-201ENSMUST00000228032 1003 ntBASIC15.66■□□□□ 0.1
Retreg3Q9CQV4 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retreg3Q9CQV4 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retreg3Q9CQV4 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retreg3Q9CQV4 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retreg3Q9CQV4 Gm10355-201ENSMUST00000097146 517 ntBASIC15.66■□□□□ 0.1
Retreg3Q9CQV4 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retreg3Q9CQV4 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retreg3Q9CQV4 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retreg3Q9CQV4 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retreg3Q9CQV4 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retreg3Q9CQV4 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retreg3Q9CQV4 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retreg3Q9CQV4 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Retreg3Q9CQV4 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.66■□□□□ 0.1
Retreg3Q9CQV4 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.66■□□□□ 0.1
Retreg3Q9CQV4 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Retreg3Q9CQV4 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retreg3Q9CQV4 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Retreg3Q9CQV4 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Retreg3Q9CQV4 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retreg3Q9CQV4 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retreg3Q9CQV4 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
Retreg3Q9CQV4 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Retreg3Q9CQV4 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retreg3Q9CQV4 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.65■□□□□ 0.1
Retreg3Q9CQV4 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retreg3Q9CQV4 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Retreg3Q9CQV4 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retreg3Q9CQV4 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retreg3Q9CQV4 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.65■□□□□ 0.1
Retreg3Q9CQV4 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.65■□□□□ 0.1
Retreg3Q9CQV4 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.65■□□□□ 0.1
Retreg3Q9CQV4 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retreg3Q9CQV4 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Retreg3Q9CQV4 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Retreg3Q9CQV4 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retreg3Q9CQV4 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retreg3Q9CQV4 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retreg3Q9CQV4 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retreg3Q9CQV4 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Retreg3Q9CQV4 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retreg3Q9CQV4 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retreg3Q9CQV4 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.65■□□□□ 0.1
Retreg3Q9CQV4 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.1
Retreg3Q9CQV4 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retreg3Q9CQV4 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Retreg3Q9CQV4 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retreg3Q9CQV4 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retreg3Q9CQV4 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.64■□□□□ 0.09
Retreg3Q9CQV4 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.64■□□□□ 0.09
Retreg3Q9CQV4 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retreg3Q9CQV4 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.64■□□□□ 0.09
Retreg3Q9CQV4 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retreg3Q9CQV4 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retreg3Q9CQV4 Gm22885-201ENSMUST00000157410 107 ntBASIC15.64■□□□□ 0.09
Retreg3Q9CQV4 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC15.64■□□□□ 0.09
Retreg3Q9CQV4 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC15.64■□□□□ 0.09
Retreg3Q9CQV4 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.64■□□□□ 0.09
Retreg3Q9CQV4 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.64■□□□□ 0.09
Retreg3Q9CQV4 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC15.64■□□□□ 0.09
Retreg3Q9CQV4 Gm45696-201ENSMUST00000212088 985 ntBASIC15.64■□□□□ 0.09
Retreg3Q9CQV4 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retreg3Q9CQV4 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retreg3Q9CQV4 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.64■□□□□ 0.09
Retreg3Q9CQV4 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retreg3Q9CQV4 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retreg3Q9CQV4 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retreg3Q9CQV4 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retreg3Q9CQV4 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retreg3Q9CQV4 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retreg3Q9CQV4 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retreg3Q9CQV4 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retreg3Q9CQV4 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retreg3Q9CQV4 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Retreg3Q9CQV4 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Retreg3Q9CQV4 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Retreg3Q9CQV4 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retreg3Q9CQV4 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retreg3Q9CQV4 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retreg3Q9CQV4 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms