Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.71□□□□□ -0.37
RTRAFQ9CQE8 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
RTRAFQ9CQE8 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
RTRAFQ9CQE8 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RTRAFQ9CQE8 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC12.71□□□□□ -0.37
RTRAFQ9CQE8 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC12.71□□□□□ -0.37
RTRAFQ9CQE8 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RTRAFQ9CQE8 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RTRAFQ9CQE8 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RTRAFQ9CQE8 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RTRAFQ9CQE8 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RTRAFQ9CQE8 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RTRAFQ9CQE8 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RTRAFQ9CQE8 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
RTRAFQ9CQE8 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RTRAFQ9CQE8 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
RTRAFQ9CQE8 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
RTRAFQ9CQE8 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.71□□□□□ -0.38
RTRAFQ9CQE8 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
RTRAFQ9CQE8 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.71□□□□□ -0.38
RTRAFQ9CQE8 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
RTRAFQ9CQE8 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RTRAFQ9CQE8 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
RTRAFQ9CQE8 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
RTRAFQ9CQE8 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
RTRAFQ9CQE8 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RTRAFQ9CQE8 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
RTRAFQ9CQE8 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RTRAFQ9CQE8 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
RTRAFQ9CQE8 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RTRAFQ9CQE8 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RTRAFQ9CQE8 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
RTRAFQ9CQE8 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RTRAFQ9CQE8 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RTRAFQ9CQE8 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RTRAFQ9CQE8 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RTRAFQ9CQE8 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RTRAFQ9CQE8 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RTRAFQ9CQE8 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
RTRAFQ9CQE8 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC12.7□□□□□ -0.38
RTRAFQ9CQE8 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC12.7□□□□□ -0.38
RTRAFQ9CQE8 Gm27405-201ENSMUST00000184201 112 ntBASIC12.7□□□□□ -0.38
RTRAFQ9CQE8 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
RTRAFQ9CQE8 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
RTRAFQ9CQE8 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RTRAFQ9CQE8 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
RTRAFQ9CQE8 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RTRAFQ9CQE8 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
RTRAFQ9CQE8 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RTRAFQ9CQE8 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RTRAFQ9CQE8 Gm43859-201ENSMUST00000200075 1412 ntBASIC12.7□□□□□ -0.38
RTRAFQ9CQE8 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
RTRAFQ9CQE8 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
RTRAFQ9CQE8 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTRAFQ9CQE8 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RTRAFQ9CQE8 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTRAFQ9CQE8 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.69□□□□□ -0.38
RTRAFQ9CQE8 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTRAFQ9CQE8 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTRAFQ9CQE8 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RTRAFQ9CQE8 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.69□□□□□ -0.38
RTRAFQ9CQE8 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTRAFQ9CQE8 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTRAFQ9CQE8 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTRAFQ9CQE8 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
RTRAFQ9CQE8 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTRAFQ9CQE8 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC12.69□□□□□ -0.38
RTRAFQ9CQE8 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC12.69□□□□□ -0.38
RTRAFQ9CQE8 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
RTRAFQ9CQE8 AC120002.2-201ENSMUST00000220205 773 ntBASIC12.69□□□□□ -0.38
RTRAFQ9CQE8 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
RTRAFQ9CQE8 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
RTRAFQ9CQE8 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTRAFQ9CQE8 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
RTRAFQ9CQE8 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTRAFQ9CQE8 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.69□□□□□ -0.38
RTRAFQ9CQE8 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RTRAFQ9CQE8 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTRAFQ9CQE8 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
RTRAFQ9CQE8 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTRAFQ9CQE8 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTRAFQ9CQE8 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
RTRAFQ9CQE8 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTRAFQ9CQE8 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTRAFQ9CQE8 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTRAFQ9CQE8 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTRAFQ9CQE8 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTRAFQ9CQE8 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTRAFQ9CQE8 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTRAFQ9CQE8 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
RTRAFQ9CQE8 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTRAFQ9CQE8 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTRAFQ9CQE8 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RTRAFQ9CQE8 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
RTRAFQ9CQE8 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RTRAFQ9CQE8 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.68□□□□□ -0.38
RTRAFQ9CQE8 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
RTRAFQ9CQE8 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RTRAFQ9CQE8 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
RTRAFQ9CQE8 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms