Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.74■□□□□ 0.43
Trim11Q99PQ2 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Trim11Q99PQ2 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim11Q99PQ2 Gm25745-201ENSMUST00000174945 133 ntBASIC17.74■□□□□ 0.43
Trim11Q99PQ2 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trim11Q99PQ2 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.74■□□□□ 0.43
Trim11Q99PQ2 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim11Q99PQ2 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.74■□□□□ 0.43
Trim11Q99PQ2 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim11Q99PQ2 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim11Q99PQ2 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim11Q99PQ2 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim11Q99PQ2 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trim11Q99PQ2 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim11Q99PQ2 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.74■□□□□ 0.43
Trim11Q99PQ2 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim11Q99PQ2 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trim11Q99PQ2 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim11Q99PQ2 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim11Q99PQ2 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim11Q99PQ2 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trim11Q99PQ2 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim11Q99PQ2 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Trim11Q99PQ2 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim11Q99PQ2 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim11Q99PQ2 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim11Q99PQ2 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Trim11Q99PQ2 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim11Q99PQ2 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim11Q99PQ2 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim11Q99PQ2 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim11Q99PQ2 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim11Q99PQ2 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim11Q99PQ2 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim11Q99PQ2 Gm14859-201ENSMUST00000117752 357 ntBASIC17.73■□□□□ 0.43
Trim11Q99PQ2 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim11Q99PQ2 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.73■□□□□ 0.43
Trim11Q99PQ2 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.73■□□□□ 0.43
Trim11Q99PQ2 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.73■□□□□ 0.43
Trim11Q99PQ2 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim11Q99PQ2 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Trim11Q99PQ2 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim11Q99PQ2 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim11Q99PQ2 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim11Q99PQ2 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim11Q99PQ2 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim11Q99PQ2 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim11Q99PQ2 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim11Q99PQ2 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.72■□□□□ 0.43
Trim11Q99PQ2 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim11Q99PQ2 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim11Q99PQ2 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim11Q99PQ2 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Trim11Q99PQ2 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trim11Q99PQ2 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim11Q99PQ2 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim11Q99PQ2 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim11Q99PQ2 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim11Q99PQ2 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim11Q99PQ2 Gm15372-201ENSMUST00000120729 834 ntBASIC17.72■□□□□ 0.43
Trim11Q99PQ2 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim11Q99PQ2 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.72■□□□□ 0.43
Trim11Q99PQ2 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim11Q99PQ2 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.72■□□□□ 0.43
Trim11Q99PQ2 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.72■□□□□ 0.43
Trim11Q99PQ2 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.72■□□□□ 0.43
Trim11Q99PQ2 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim11Q99PQ2 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim11Q99PQ2 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim11Q99PQ2 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim11Q99PQ2 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Trim11Q99PQ2 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim11Q99PQ2 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim11Q99PQ2 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim11Q99PQ2 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim11Q99PQ2 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim11Q99PQ2 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.72■□□□□ 0.43
Trim11Q99PQ2 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim11Q99PQ2 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim11Q99PQ2 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim11Q99PQ2 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim11Q99PQ2 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Trim11Q99PQ2 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim11Q99PQ2 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Trim11Q99PQ2 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.71■□□□□ 0.43
Trim11Q99PQ2 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim11Q99PQ2 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Trim11Q99PQ2 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim11Q99PQ2 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim11Q99PQ2 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.71■□□□□ 0.43
Trim11Q99PQ2 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Trim11Q99PQ2 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim11Q99PQ2 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim11Q99PQ2 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trim11Q99PQ2 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.71■□□□□ 0.43
Trim11Q99PQ2 Gm27867-201ENSMUST00000184778 125 ntBASIC17.71■□□□□ 0.43
Trim11Q99PQ2 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.71■□□□□ 0.43
Trim11Q99PQ2 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.71■□□□□ 0.43
Trim11Q99PQ2 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim11Q99PQ2 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms