Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Nkd1Q99MH6 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Nkd1Q99MH6 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.06
Nkd1Q99MH6 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Nkd1Q99MH6 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Nkd1Q99MH6 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Nkd1Q99MH6 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Nkd1Q99MH6 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkd1Q99MH6 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkd1Q99MH6 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkd1Q99MH6 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkd1Q99MH6 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkd1Q99MH6 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkd1Q99MH6 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nkd1Q99MH6 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkd1Q99MH6 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkd1Q99MH6 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.7□□□□□ -0.06
Nkd1Q99MH6 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nkd1Q99MH6 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.7□□□□□ -0.06
Nkd1Q99MH6 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkd1Q99MH6 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.7□□□□□ -0.06
Nkd1Q99MH6 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Nkd1Q99MH6 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkd1Q99MH6 Gm9987-201ENSMUST00000069768 567 ntBASIC14.7□□□□□ -0.06
Nkd1Q99MH6 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkd1Q99MH6 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkd1Q99MH6 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkd1Q99MH6 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkd1Q99MH6 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.7□□□□□ -0.06
Nkd1Q99MH6 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkd1Q99MH6 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkd1Q99MH6 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkd1Q99MH6 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.7□□□□□ -0.06
Nkd1Q99MH6 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkd1Q99MH6 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
Nkd1Q99MH6 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkd1Q99MH6 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Nkd1Q99MH6 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Nkd1Q99MH6 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Nkd1Q99MH6 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkd1Q99MH6 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkd1Q99MH6 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkd1Q99MH6 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkd1Q99MH6 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Nkd1Q99MH6 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nkd1Q99MH6 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nkd1Q99MH6 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nkd1Q99MH6 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nkd1Q99MH6 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nkd1Q99MH6 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.69□□□□□ -0.06
Nkd1Q99MH6 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nkd1Q99MH6 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nkd1Q99MH6 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkd1Q99MH6 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nkd1Q99MH6 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Nkd1Q99MH6 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkd1Q99MH6 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkd1Q99MH6 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Nkd1Q99MH6 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nkd1Q99MH6 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nkd1Q99MH6 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkd1Q99MH6 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Nkd1Q99MH6 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nkd1Q99MH6 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.69□□□□□ -0.06
Nkd1Q99MH6 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.69□□□□□ -0.06
Nkd1Q99MH6 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Nkd1Q99MH6 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkd1Q99MH6 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkd1Q99MH6 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.68□□□□□ -0.06
Nkd1Q99MH6 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkd1Q99MH6 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkd1Q99MH6 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nkd1Q99MH6 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Nkd1Q99MH6 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Nkd1Q99MH6 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nkd1Q99MH6 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Nkd1Q99MH6 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkd1Q99MH6 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nkd1Q99MH6 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.68□□□□□ -0.06
Nkd1Q99MH6 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkd1Q99MH6 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Nkd1Q99MH6 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkd1Q99MH6 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.68□□□□□ -0.06
Nkd1Q99MH6 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkd1Q99MH6 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Nkd1Q99MH6 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkd1Q99MH6 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkd1Q99MH6 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkd1Q99MH6 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Nkd1Q99MH6 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkd1Q99MH6 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nkd1Q99MH6 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkd1Q99MH6 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkd1Q99MH6 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkd1Q99MH6 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkd1Q99MH6 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
Nkd1Q99MH6 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkd1Q99MH6 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.67□□□□□ -0.06
Nkd1Q99MH6 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Nkd1Q99MH6 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms