Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cstf1Q99LC2 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cstf1Q99LC2 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cstf1Q99LC2 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cstf1Q99LC2 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
Cstf1Q99LC2 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cstf1Q99LC2 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cstf1Q99LC2 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.52■□□□□ 0.08
Cstf1Q99LC2 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cstf1Q99LC2 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cstf1Q99LC2 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Cstf1Q99LC2 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cstf1Q99LC2 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.52■□□□□ 0.08
Cstf1Q99LC2 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.52■□□□□ 0.08
Cstf1Q99LC2 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cstf1Q99LC2 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cstf1Q99LC2 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cstf1Q99LC2 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cstf1Q99LC2 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Cstf1Q99LC2 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.52■□□□□ 0.08
Cstf1Q99LC2 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.52■□□□□ 0.08
Cstf1Q99LC2 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.52■□□□□ 0.08
Cstf1Q99LC2 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cstf1Q99LC2 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.52■□□□□ 0.08
Cstf1Q99LC2 Rprl2-201ENSMUST00000157150 290 ntBASIC15.52■□□□□ 0.08
Cstf1Q99LC2 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cstf1Q99LC2 Mir6977-201ENSMUST00000184960 64 ntBASIC15.52■□□□□ 0.08
Cstf1Q99LC2 AC140375.2-201ENSMUST00000225283 584 ntBASIC15.52■□□□□ 0.08
Cstf1Q99LC2 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cstf1Q99LC2 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
Cstf1Q99LC2 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cstf1Q99LC2 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cstf1Q99LC2 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Cstf1Q99LC2 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cstf1Q99LC2 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cstf1Q99LC2 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cstf1Q99LC2 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cstf1Q99LC2 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.51■□□□□ 0.07
Cstf1Q99LC2 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
Cstf1Q99LC2 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cstf1Q99LC2 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cstf1Q99LC2 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cstf1Q99LC2 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cstf1Q99LC2 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.51■□□□□ 0.07
Cstf1Q99LC2 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cstf1Q99LC2 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cstf1Q99LC2 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cstf1Q99LC2 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.51■□□□□ 0.07
Cstf1Q99LC2 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.51■□□□□ 0.07
Cstf1Q99LC2 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Cstf1Q99LC2 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.51■□□□□ 0.07
Cstf1Q99LC2 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.51■□□□□ 0.07
Cstf1Q99LC2 Gm18889-201ENSMUST00000174284 929 ntBASIC15.51■□□□□ 0.07
Cstf1Q99LC2 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.51■□□□□ 0.07
Cstf1Q99LC2 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cstf1Q99LC2 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cstf1Q99LC2 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Cstf1Q99LC2 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cstf1Q99LC2 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cstf1Q99LC2 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cstf1Q99LC2 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cstf1Q99LC2 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cstf1Q99LC2 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cstf1Q99LC2 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cstf1Q99LC2 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cstf1Q99LC2 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cstf1Q99LC2 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.5■□□□□ 0.07
Cstf1Q99LC2 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Cstf1Q99LC2 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Cstf1Q99LC2 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.5■□□□□ 0.07
Cstf1Q99LC2 Gm12428-201ENSMUST00000119844 727 ntBASIC15.5■□□□□ 0.07
Cstf1Q99LC2 Gm11424-201ENSMUST00000121929 829 ntBASIC15.5■□□□□ 0.07
Cstf1Q99LC2 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cstf1Q99LC2 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Cstf1Q99LC2 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.5■□□□□ 0.07
Cstf1Q99LC2 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Cstf1Q99LC2 Gm43125-201ENSMUST00000201724 730 ntBASIC15.5■□□□□ 0.07
Cstf1Q99LC2 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.5■□□□□ 0.07
Cstf1Q99LC2 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cstf1Q99LC2 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cstf1Q99LC2 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cstf1Q99LC2 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cstf1Q99LC2 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.5■□□□□ 0.07
Cstf1Q99LC2 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.5■□□□□ 0.07
Cstf1Q99LC2 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.5■□□□□ 0.07
Cstf1Q99LC2 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cstf1Q99LC2 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Cstf1Q99LC2 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cstf1Q99LC2 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Cstf1Q99LC2 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cstf1Q99LC2 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cstf1Q99LC2 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Cstf1Q99LC2 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cstf1Q99LC2 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cstf1Q99LC2 Mir449b-201ENSMUST00000104833 80 ntBASIC15.49■□□□□ 0.07
Cstf1Q99LC2 Gm27430-201ENSMUST00000184585 107 ntBASIC15.49■□□□□ 0.07
Cstf1Q99LC2 Gm44333-201ENSMUST00000197168 107 ntBASIC15.49■□□□□ 0.07
Cstf1Q99LC2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cstf1Q99LC2 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cstf1Q99LC2 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms