Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lims1Q99JW4 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lims1Q99JW4 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.19□□□□□ -0.14
Lims1Q99JW4 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Lims1Q99JW4 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lims1Q99JW4 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lims1Q99JW4 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lims1Q99JW4 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.19□□□□□ -0.14
Lims1Q99JW4 Gm13312-201ENSMUST00000119631 718 ntBASIC14.19□□□□□ -0.14
Lims1Q99JW4 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Lims1Q99JW4 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.19□□□□□ -0.14
Lims1Q99JW4 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.19□□□□□ -0.14
Lims1Q99JW4 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Lims1Q99JW4 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lims1Q99JW4 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Lims1Q99JW4 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lims1Q99JW4 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.19□□□□□ -0.14
Lims1Q99JW4 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lims1Q99JW4 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.19□□□□□ -0.14
Lims1Q99JW4 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Lims1Q99JW4 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lims1Q99JW4 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lims1Q99JW4 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lims1Q99JW4 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lims1Q99JW4 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lims1Q99JW4 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lims1Q99JW4 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lims1Q99JW4 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lims1Q99JW4 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lims1Q99JW4 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.18□□□□□ -0.14
Lims1Q99JW4 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lims1Q99JW4 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lims1Q99JW4 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lims1Q99JW4 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lims1Q99JW4 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lims1Q99JW4 Gm14722-201ENSMUST00000118943 689 ntBASIC14.18□□□□□ -0.14
Lims1Q99JW4 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.18□□□□□ -0.14
Lims1Q99JW4 Gm45328-201ENSMUST00000210942 917 ntBASIC14.18□□□□□ -0.14
Lims1Q99JW4 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lims1Q99JW4 Gm10819-201ENSMUST00000099988 561 ntBASIC14.18□□□□□ -0.14
Lims1Q99JW4 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lims1Q99JW4 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lims1Q99JW4 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lims1Q99JW4 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Lims1Q99JW4 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lims1Q99JW4 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lims1Q99JW4 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lims1Q99JW4 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.18□□□□□ -0.14
Lims1Q99JW4 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lims1Q99JW4 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Lims1Q99JW4 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lims1Q99JW4 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lims1Q99JW4 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lims1Q99JW4 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lims1Q99JW4 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Lims1Q99JW4 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lims1Q99JW4 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lims1Q99JW4 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lims1Q99JW4 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Lims1Q99JW4 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lims1Q99JW4 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lims1Q99JW4 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lims1Q99JW4 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Lims1Q99JW4 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Lims1Q99JW4 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lims1Q99JW4 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lims1Q99JW4 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.17□□□□□ -0.14
Lims1Q99JW4 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.17□□□□□ -0.14
Lims1Q99JW4 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lims1Q99JW4 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.17□□□□□ -0.14
Lims1Q99JW4 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.17□□□□□ -0.14
Lims1Q99JW4 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.17□□□□□ -0.14
Lims1Q99JW4 Gm17808-201ENSMUST00000200859 894 ntBASIC14.17□□□□□ -0.14
Lims1Q99JW4 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lims1Q99JW4 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lims1Q99JW4 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lims1Q99JW4 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lims1Q99JW4 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lims1Q99JW4 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lims1Q99JW4 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Lims1Q99JW4 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Lims1Q99JW4 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lims1Q99JW4 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.17□□□□□ -0.14
Lims1Q99JW4 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lims1Q99JW4 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lims1Q99JW4 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lims1Q99JW4 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lims1Q99JW4 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lims1Q99JW4 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lims1Q99JW4 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lims1Q99JW4 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lims1Q99JW4 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lims1Q99JW4 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lims1Q99JW4 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Lims1Q99JW4 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lims1Q99JW4 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lims1Q99JW4 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
Lims1Q99JW4 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lims1Q99JW4 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Lims1Q99JW4 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms