Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfc4Q99J62 Rprl2-201ENSMUST00000157150 290 ntBASIC17.89■□□□□ 0.45
Rfc4Q99J62 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC17.89■□□□□ 0.45
Rfc4Q99J62 Gm18246-201ENSMUST00000221023 728 ntBASIC17.89■□□□□ 0.45
Rfc4Q99J62 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfc4Q99J62 Fgf17-202ENSMUST00000227123 1336 ntBASIC17.89■□□□□ 0.45
Rfc4Q99J62 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfc4Q99J62 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfc4Q99J62 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfc4Q99J62 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfc4Q99J62 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.88■□□□□ 0.45
Rfc4Q99J62 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfc4Q99J62 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfc4Q99J62 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Rfc4Q99J62 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Rfc4Q99J62 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.88■□□□□ 0.45
Rfc4Q99J62 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC17.88■□□□□ 0.45
Rfc4Q99J62 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfc4Q99J62 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfc4Q99J62 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rfc4Q99J62 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Rfc4Q99J62 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Rfc4Q99J62 Gm20949-201ENSMUST00000206478 952 ntBASIC17.88■□□□□ 0.45
Rfc4Q99J62 Gm5186-201ENSMUST00000218781 920 ntBASIC17.88■□□□□ 0.45
Rfc4Q99J62 AC140397.2-201ENSMUST00000224213 834 ntBASIC17.88■□□□□ 0.45
Rfc4Q99J62 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Rfc4Q99J62 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rfc4Q99J62 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.88■□□□□ 0.45
Rfc4Q99J62 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Rfc4Q99J62 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfc4Q99J62 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rfc4Q99J62 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfc4Q99J62 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfc4Q99J62 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfc4Q99J62 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Rfc4Q99J62 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfc4Q99J62 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfc4Q99J62 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rfc4Q99J62 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfc4Q99J62 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Rfc4Q99J62 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.87■□□□□ 0.45
Rfc4Q99J62 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Rfc4Q99J62 Gm43474-201ENSMUST00000196415 774 ntBASIC17.87■□□□□ 0.45
Rfc4Q99J62 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.87■□□□□ 0.45
Rfc4Q99J62 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.87■□□□□ 0.45
Rfc4Q99J62 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfc4Q99J62 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC17.87■□□□□ 0.45
Rfc4Q99J62 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfc4Q99J62 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Rfc4Q99J62 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rfc4Q99J62 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.87■□□□□ 0.45
Rfc4Q99J62 Gm13127-201ENSMUST00000118978 1389 ntBASIC17.87■□□□□ 0.45
Rfc4Q99J62 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfc4Q99J62 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfc4Q99J62 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfc4Q99J62 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Rfc4Q99J62 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfc4Q99J62 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfc4Q99J62 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfc4Q99J62 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfc4Q99J62 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Rfc4Q99J62 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfc4Q99J62 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rfc4Q99J62 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfc4Q99J62 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Rfc4Q99J62 Gm18889-201ENSMUST00000174284 929 ntBASIC17.86■□□□□ 0.45
Rfc4Q99J62 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rfc4Q99J62 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfc4Q99J62 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfc4Q99J62 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.86■□□□□ 0.45
Rfc4Q99J62 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfc4Q99J62 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Rfc4Q99J62 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfc4Q99J62 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfc4Q99J62 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rfc4Q99J62 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rfc4Q99J62 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfc4Q99J62 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Rfc4Q99J62 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfc4Q99J62 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfc4Q99J62 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfc4Q99J62 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Rfc4Q99J62 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.85■□□□□ 0.45
Rfc4Q99J62 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.85■□□□□ 0.45
Rfc4Q99J62 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.85■□□□□ 0.45
Rfc4Q99J62 Gm25948-201ENSMUST00000175334 112 ntBASIC17.85■□□□□ 0.45
Rfc4Q99J62 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfc4Q99J62 Gm20553-201ENSMUST00000204205 844 ntBASIC17.85■□□□□ 0.45
Rfc4Q99J62 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Rfc4Q99J62 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.85■□□□□ 0.45
Rfc4Q99J62 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.85■□□□□ 0.45
Rfc4Q99J62 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfc4Q99J62 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.85■□□□□ 0.45
Rfc4Q99J62 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfc4Q99J62 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfc4Q99J62 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfc4Q99J62 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfc4Q99J62 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfc4Q99J62 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfc4Q99J62 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms