Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col20a1Q923P0 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col20a1Q923P0 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col20a1Q923P0 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col20a1Q923P0 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col20a1Q923P0 Gm5184-201ENSMUST00000220417 1702 ntBASIC18.34■□□□□ 0.53
Col20a1Q923P0 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Col20a1Q923P0 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
Col20a1Q923P0 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col20a1Q923P0 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col20a1Q923P0 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Col20a1Q923P0 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Col20a1Q923P0 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col20a1Q923P0 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col20a1Q923P0 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col20a1Q923P0 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC18.33■□□□□ 0.53
Col20a1Q923P0 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col20a1Q923P0 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Col20a1Q923P0 Gm17968-201ENSMUST00000194902 784 ntBASIC18.33■□□□□ 0.53
Col20a1Q923P0 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col20a1Q923P0 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Col20a1Q923P0 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col20a1Q923P0 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col20a1Q923P0 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Col20a1Q923P0 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col20a1Q923P0 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC18.32■□□□□ 0.52
Col20a1Q923P0 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col20a1Q923P0 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Col20a1Q923P0 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col20a1Q923P0 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col20a1Q923P0 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col20a1Q923P0 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col20a1Q923P0 Gm5648-201ENSMUST00000122244 1587 ntBASIC18.32■□□□□ 0.52
Col20a1Q923P0 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col20a1Q923P0 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col20a1Q923P0 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col20a1Q923P0 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Col20a1Q923P0 Gm44492-201ENSMUST00000197012 141 ntBASIC18.32■□□□□ 0.52
Col20a1Q923P0 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col20a1Q923P0 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col20a1Q923P0 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col20a1Q923P0 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col20a1Q923P0 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col20a1Q923P0 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Col20a1Q923P0 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col20a1Q923P0 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Col20a1Q923P0 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.32■□□□□ 0.52
Col20a1Q923P0 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Col20a1Q923P0 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col20a1Q923P0 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col20a1Q923P0 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col20a1Q923P0 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col20a1Q923P0 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col20a1Q923P0 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC18.31■□□□□ 0.52
Col20a1Q923P0 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Col20a1Q923P0 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col20a1Q923P0 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Col20a1Q923P0 Gm5177-201ENSMUST00000183092 997 ntBASIC18.31■□□□□ 0.52
Col20a1Q923P0 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col20a1Q923P0 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col20a1Q923P0 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col20a1Q923P0 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.31■□□□□ 0.52
Col20a1Q923P0 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Col20a1Q923P0 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Col20a1Q923P0 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col20a1Q923P0 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Col20a1Q923P0 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col20a1Q923P0 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Col20a1Q923P0 Gm29361-201ENSMUST00000183323 2000 ntBASIC18.31■□□□□ 0.52
Col20a1Q923P0 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Col20a1Q923P0 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.31■□□□□ 0.52
Col20a1Q923P0 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.31■□□□□ 0.52
Col20a1Q923P0 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col20a1Q923P0 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col20a1Q923P0 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col20a1Q923P0 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col20a1Q923P0 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Col20a1Q923P0 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Col20a1Q923P0 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col20a1Q923P0 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col20a1Q923P0 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.3■□□□□ 0.52
Col20a1Q923P0 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Col20a1Q923P0 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Col20a1Q923P0 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col20a1Q923P0 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Col20a1Q923P0 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col20a1Q923P0 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col20a1Q923P0 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col20a1Q923P0 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col20a1Q923P0 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col20a1Q923P0 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col20a1Q923P0 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Col20a1Q923P0 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col20a1Q923P0 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col20a1Q923P0 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Col20a1Q923P0 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col20a1Q923P0 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col20a1Q923P0 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col20a1Q923P0 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col20a1Q923P0 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms