Protein–RNA interactions for Protein: Q921M3

Sf3b3, Splicing factor 3B subunit 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3Q921M3 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sf3b3Q921M3 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3b3Q921M3 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3b3Q921M3 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
Sf3b3Q921M3 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3b3Q921M3 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Sf3b3Q921M3 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3b3Q921M3 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3b3Q921M3 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3b3Q921M3 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC18.63■□□□□ 0.57
Sf3b3Q921M3 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3b3Q921M3 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3b3Q921M3 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3b3Q921M3 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3b3Q921M3 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3b3Q921M3 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC18.63■□□□□ 0.57
Sf3b3Q921M3 AC131710.1-201ENSMUST00000228336 990 ntBASIC18.63■□□□□ 0.57
Sf3b3Q921M3 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3b3Q921M3 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3b3Q921M3 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3b3Q921M3 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Sf3b3Q921M3 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3b3Q921M3 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3b3Q921M3 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3b3Q921M3 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC18.63■□□□□ 0.57
Sf3b3Q921M3 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3b3Q921M3 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3b3Q921M3 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3b3Q921M3 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC18.63■□□□□ 0.57
Sf3b3Q921M3 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3b3Q921M3 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3b3Q921M3 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3b3Q921M3 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3b3Q921M3 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3b3Q921M3 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3b3Q921M3 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3b3Q921M3 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3b3Q921M3 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3b3Q921M3 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3b3Q921M3 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Sf3b3Q921M3 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3b3Q921M3 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Sf3b3Q921M3 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC18.62■□□□□ 0.57
Sf3b3Q921M3 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC18.62■□□□□ 0.57
Sf3b3Q921M3 Gm22175-201ENSMUST00000175007 78 ntBASIC18.62■□□□□ 0.57
Sf3b3Q921M3 Gm7556-201ENSMUST00000201178 1084 ntBASIC18.62■□□□□ 0.57
Sf3b3Q921M3 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC18.62■□□□□ 0.57
Sf3b3Q921M3 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3b3Q921M3 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3b3Q921M3 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Sf3b3Q921M3 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3b3Q921M3 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3b3Q921M3 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.62■□□□□ 0.57
Sf3b3Q921M3 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3b3Q921M3 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3b3Q921M3 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3b3Q921M3 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3b3Q921M3 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sf3b3Q921M3 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Sf3b3Q921M3 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sf3b3Q921M3 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Sf3b3Q921M3 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.61■□□□□ 0.57
Sf3b3Q921M3 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sf3b3Q921M3 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sf3b3Q921M3 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sf3b3Q921M3 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Sf3b3Q921M3 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC18.61■□□□□ 0.57
Sf3b3Q921M3 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sf3b3Q921M3 Gm6973-201ENSMUST00000117080 721 ntBASIC18.61■□□□□ 0.57
Sf3b3Q921M3 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sf3b3Q921M3 Mir7023-201ENSMUST00000185093 64 ntBASIC18.61■□□□□ 0.57
Sf3b3Q921M3 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sf3b3Q921M3 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Sf3b3Q921M3 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sf3b3Q921M3 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.61■□□□□ 0.57
Sf3b3Q921M3 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sf3b3Q921M3 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sf3b3Q921M3 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sf3b3Q921M3 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Sf3b3Q921M3 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sf3b3Q921M3 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Sf3b3Q921M3 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sf3b3Q921M3 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
Sf3b3Q921M3 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sf3b3Q921M3 Gm7336-201ENSMUST00000107041 1232 ntBASIC18.6■□□□□ 0.57
Sf3b3Q921M3 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC18.6■□□□□ 0.57
Sf3b3Q921M3 Gm10253-201ENSMUST00000194270 940 ntBASIC18.6■□□□□ 0.57
Sf3b3Q921M3 AC131187.1-201ENSMUST00000224567 809 ntBASIC18.6■□□□□ 0.57
Sf3b3Q921M3 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sf3b3Q921M3 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sf3b3Q921M3 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sf3b3Q921M3 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sf3b3Q921M3 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sf3b3Q921M3 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.6■□□□□ 0.57
Sf3b3Q921M3 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sf3b3Q921M3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Sf3b3Q921M3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.6■□□□□ 0.57
Sf3b3Q921M3 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sf3b3Q921M3 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sf3b3Q921M3 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms