Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Smc1bQ920F6 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smc1bQ920F6 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smc1bQ920F6 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
Smc1bQ920F6 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc1bQ920F6 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc1bQ920F6 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Smc1bQ920F6 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc1bQ920F6 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc1bQ920F6 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc1bQ920F6 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Smc1bQ920F6 Gm44872-201ENSMUST00000207864 420 ntBASIC17.93■□□□□ 0.46
Smc1bQ920F6 Gm9172-201ENSMUST00000212092 954 ntBASIC17.93■□□□□ 0.46
Smc1bQ920F6 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.93■□□□□ 0.46
Smc1bQ920F6 Gm15500-202ENSMUST00000071641 1019 ntBASIC17.93■□□□□ 0.46
Smc1bQ920F6 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.93■□□□□ 0.46
Smc1bQ920F6 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc1bQ920F6 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc1bQ920F6 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.93■□□□□ 0.46
Smc1bQ920F6 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.93■□□□□ 0.46
Smc1bQ920F6 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Smc1bQ920F6 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc1bQ920F6 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc1bQ920F6 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.93■□□□□ 0.46
Smc1bQ920F6 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc1bQ920F6 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Smc1bQ920F6 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smc1bQ920F6 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.92■□□□□ 0.46
Smc1bQ920F6 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Smc1bQ920F6 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.92■□□□□ 0.46
Smc1bQ920F6 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.92■□□□□ 0.46
Smc1bQ920F6 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Smc1bQ920F6 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.92■□□□□ 0.46
Smc1bQ920F6 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smc1bQ920F6 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smc1bQ920F6 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.92■□□□□ 0.46
Smc1bQ920F6 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smc1bQ920F6 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Smc1bQ920F6 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Smc1bQ920F6 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smc1bQ920F6 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smc1bQ920F6 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smc1bQ920F6 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Smc1bQ920F6 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smc1bQ920F6 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smc1bQ920F6 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smc1bQ920F6 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smc1bQ920F6 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Smc1bQ920F6 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc1bQ920F6 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Smc1bQ920F6 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc1bQ920F6 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Smc1bQ920F6 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Smc1bQ920F6 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc1bQ920F6 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc1bQ920F6 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc1bQ920F6 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc1bQ920F6 Gm14701-201ENSMUST00000117156 348 ntBASIC17.91■□□□□ 0.46
Smc1bQ920F6 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC17.91■□□□□ 0.46
Smc1bQ920F6 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Smc1bQ920F6 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.91■□□□□ 0.46
Smc1bQ920F6 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.91■□□□□ 0.46
Smc1bQ920F6 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.91■□□□□ 0.46
Smc1bQ920F6 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.91■□□□□ 0.46
Smc1bQ920F6 AC159114.1-201ENSMUST00000220349 266 ntBASIC17.91■□□□□ 0.46
Smc1bQ920F6 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Smc1bQ920F6 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc1bQ920F6 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc1bQ920F6 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Smc1bQ920F6 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Smc1bQ920F6 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Smc1bQ920F6 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Smc1bQ920F6 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc1bQ920F6 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc1bQ920F6 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc1bQ920F6 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc1bQ920F6 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Smc1bQ920F6 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.91■□□□□ 0.46
Smc1bQ920F6 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Smc1bQ920F6 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Smc1bQ920F6 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smc1bQ920F6 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smc1bQ920F6 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smc1bQ920F6 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smc1bQ920F6 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Smc1bQ920F6 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smc1bQ920F6 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Smc1bQ920F6 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
Smc1bQ920F6 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smc1bQ920F6 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Smc1bQ920F6 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17.9■□□□□ 0.46
Smc1bQ920F6 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.9■□□□□ 0.46
Smc1bQ920F6 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Smc1bQ920F6 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smc1bQ920F6 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smc1bQ920F6 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.9■□□□□ 0.46
Smc1bQ920F6 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smc1bQ920F6 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Smc1bQ920F6 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smc1bQ920F6 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms