Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha2Q91Y17 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha2Q91Y17 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha2Q91Y17 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha2Q91Y17 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha2Q91Y17 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha2Q91Y17 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha2Q91Y17 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha2Q91Y17 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.54■□□□□ 0.24
Pcdha2Q91Y17 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Pcdha2Q91Y17 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.54■□□□□ 0.24
Pcdha2Q91Y17 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.54■□□□□ 0.24
Pcdha2Q91Y17 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.54■□□□□ 0.24
Pcdha2Q91Y17 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha2Q91Y17 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha2Q91Y17 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Pcdha2Q91Y17 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Pcdha2Q91Y17 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha2Q91Y17 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha2Q91Y17 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha2Q91Y17 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.54■□□□□ 0.24
Pcdha2Q91Y17 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.54■□□□□ 0.24
Pcdha2Q91Y17 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha2Q91Y17 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.53■□□□□ 0.24
Pcdha2Q91Y17 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha2Q91Y17 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha2Q91Y17 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha2Q91Y17 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha2Q91Y17 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Pcdha2Q91Y17 Gm1401-201ENSMUST00000122048 772 ntBASIC16.53■□□□□ 0.24
Pcdha2Q91Y17 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.53■□□□□ 0.24
Pcdha2Q91Y17 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.53■□□□□ 0.24
Pcdha2Q91Y17 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.53■□□□□ 0.24
Pcdha2Q91Y17 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.53■□□□□ 0.24
Pcdha2Q91Y17 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.53■□□□□ 0.24
Pcdha2Q91Y17 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.53■□□□□ 0.24
Pcdha2Q91Y17 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Pcdha2Q91Y17 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.53■□□□□ 0.24
Pcdha2Q91Y17 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha2Q91Y17 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha2Q91Y17 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha2Q91Y17 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Pcdha2Q91Y17 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha2Q91Y17 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha2Q91Y17 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha2Q91Y17 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha2Q91Y17 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha2Q91Y17 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha2Q91Y17 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha2Q91Y17 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha2Q91Y17 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha2Q91Y17 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Pcdha2Q91Y17 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Pcdha2Q91Y17 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha2Q91Y17 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha2Q91Y17 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha2Q91Y17 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha2Q91Y17 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha2Q91Y17 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha2Q91Y17 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha2Q91Y17 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Pcdha2Q91Y17 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.52■□□□□ 0.24
Pcdha2Q91Y17 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha2Q91Y17 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.52■□□□□ 0.24
Pcdha2Q91Y17 Gm6443-201ENSMUST00000203599 874 ntBASIC16.52■□□□□ 0.24
Pcdha2Q91Y17 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.52■□□□□ 0.24
Pcdha2Q91Y17 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Pcdha2Q91Y17 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha2Q91Y17 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha2Q91Y17 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha2Q91Y17 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha2Q91Y17 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.52■□□□□ 0.24
Pcdha2Q91Y17 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdha2Q91Y17 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdha2Q91Y17 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Pcdha2Q91Y17 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdha2Q91Y17 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdha2Q91Y17 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Pcdha2Q91Y17 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.52■□□□□ 0.23
Pcdha2Q91Y17 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Pcdha2Q91Y17 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha2Q91Y17 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha2Q91Y17 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha2Q91Y17 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha2Q91Y17 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha2Q91Y17 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Pcdha2Q91Y17 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha2Q91Y17 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha2Q91Y17 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha2Q91Y17 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha2Q91Y17 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha2Q91Y17 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.51■□□□□ 0.23
Pcdha2Q91Y17 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.51■□□□□ 0.23
Pcdha2Q91Y17 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha2Q91Y17 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Pcdha2Q91Y17 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha2Q91Y17 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha2Q91Y17 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha2Q91Y17 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Pcdha2Q91Y17 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms