Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Pcdhb2Q91Y00 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb2Q91Y00 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Pcdhb2Q91Y00 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Pcdhb2Q91Y00 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb2Q91Y00 Gm27646-201ENSMUST00000183989 110 ntBASIC16.52■□□□□ 0.24
Pcdhb2Q91Y00 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb2Q91Y00 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb2Q91Y00 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb2Q91Y00 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb2Q91Y00 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb2Q91Y00 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.52■□□□□ 0.23
Pcdhb2Q91Y00 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb2Q91Y00 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb2Q91Y00 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Pcdhb2Q91Y00 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb2Q91Y00 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Pcdhb2Q91Y00 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb2Q91Y00 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb2Q91Y00 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.51■□□□□ 0.23
Pcdhb2Q91Y00 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb2Q91Y00 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Pcdhb2Q91Y00 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb2Q91Y00 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.51■□□□□ 0.23
Pcdhb2Q91Y00 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb2Q91Y00 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Pcdhb2Q91Y00 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Pcdhb2Q91Y00 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb2Q91Y00 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Pcdhb2Q91Y00 Gm15358-201ENSMUST00000119249 520 ntBASIC16.51■□□□□ 0.23
Pcdhb2Q91Y00 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.51■□□□□ 0.23
Pcdhb2Q91Y00 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.51■□□□□ 0.23
Pcdhb2Q91Y00 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb2Q91Y00 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.51■□□□□ 0.23
Pcdhb2Q91Y00 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb2Q91Y00 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.51■□□□□ 0.23
Pcdhb2Q91Y00 AV026068-213ENSMUST00000223675 1171 ntBASIC16.51■□□□□ 0.23
Pcdhb2Q91Y00 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb2Q91Y00 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Pcdhb2Q91Y00 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb2Q91Y00 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb2Q91Y00 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb2Q91Y00 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb2Q91Y00 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb2Q91Y00 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Pcdhb2Q91Y00 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb2Q91Y00 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb2Q91Y00 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb2Q91Y00 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb2Q91Y00 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Pcdhb2Q91Y00 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb2Q91Y00 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb2Q91Y00 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb2Q91Y00 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb2Q91Y00 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Pcdhb2Q91Y00 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb2Q91Y00 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb2Q91Y00 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Pcdhb2Q91Y00 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdhb2Q91Y00 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Pcdhb2Q91Y00 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb2Q91Y00 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb2Q91Y00 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb2Q91Y00 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
Pcdhb2Q91Y00 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb2Q91Y00 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdhb2Q91Y00 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb2Q91Y00 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Pcdhb2Q91Y00 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb2Q91Y00 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb2Q91Y00 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb2Q91Y00 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb2Q91Y00 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb2Q91Y00 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb2Q91Y00 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb2Q91Y00 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Pcdhb2Q91Y00 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb2Q91Y00 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb2Q91Y00 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb2Q91Y00 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Pcdhb2Q91Y00 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb2Q91Y00 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb2Q91Y00 Mir5126-201ENSMUST00000175513 77 ntBASIC16.49■□□□□ 0.23
Pcdhb2Q91Y00 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb2Q91Y00 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.49■□□□□ 0.23
Pcdhb2Q91Y00 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Pcdhb2Q91Y00 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb2Q91Y00 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb2Q91Y00 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb2Q91Y00 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb2Q91Y00 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb2Q91Y00 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb2Q91Y00 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Pcdhb2Q91Y00 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb2Q91Y00 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb2Q91Y00 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb2Q91Y00 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb2Q91Y00 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
Pcdhb2Q91Y00 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb2Q91Y00 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms