Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb4Q91XZ6 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb4Q91XZ6 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.49■□□□□ 0.07
Pcdhb4Q91XZ6 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.49■□□□□ 0.07
Pcdhb4Q91XZ6 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb4Q91XZ6 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb4Q91XZ6 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb4Q91XZ6 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Pcdhb4Q91XZ6 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb4Q91XZ6 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb4Q91XZ6 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb4Q91XZ6 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb4Q91XZ6 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb4Q91XZ6 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb4Q91XZ6 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb4Q91XZ6 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb4Q91XZ6 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb4Q91XZ6 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb4Q91XZ6 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Pcdhb4Q91XZ6 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb4Q91XZ6 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb4Q91XZ6 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
Pcdhb4Q91XZ6 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Pcdhb4Q91XZ6 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb4Q91XZ6 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb4Q91XZ6 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
Pcdhb4Q91XZ6 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
Pcdhb4Q91XZ6 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Pcdhb4Q91XZ6 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Pcdhb4Q91XZ6 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb4Q91XZ6 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb4Q91XZ6 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Pcdhb4Q91XZ6 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb4Q91XZ6 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb4Q91XZ6 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb4Q91XZ6 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb4Q91XZ6 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb4Q91XZ6 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Pcdhb4Q91XZ6 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Pcdhb4Q91XZ6 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb4Q91XZ6 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb4Q91XZ6 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb4Q91XZ6 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb4Q91XZ6 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
Pcdhb4Q91XZ6 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb4Q91XZ6 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb4Q91XZ6 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb4Q91XZ6 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb4Q91XZ6 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb4Q91XZ6 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb4Q91XZ6 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.47■□□□□ 0.07
Pcdhb4Q91XZ6 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb4Q91XZ6 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb4Q91XZ6 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb4Q91XZ6 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.47■□□□□ 0.07
Pcdhb4Q91XZ6 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb4Q91XZ6 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb4Q91XZ6 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.47■□□□□ 0.07
Pcdhb4Q91XZ6 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb4Q91XZ6 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb4Q91XZ6 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pcdhb4Q91XZ6 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb4Q91XZ6 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Pcdhb4Q91XZ6 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pcdhb4Q91XZ6 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Pcdhb4Q91XZ6 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.47■□□□□ 0.07
Pcdhb4Q91XZ6 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb4Q91XZ6 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb4Q91XZ6 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb4Q91XZ6 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb4Q91XZ6 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb4Q91XZ6 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb4Q91XZ6 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.46■□□□□ 0.07
Pcdhb4Q91XZ6 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Pcdhb4Q91XZ6 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb4Q91XZ6 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.46■□□□□ 0.07
Pcdhb4Q91XZ6 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.46■□□□□ 0.07
Pcdhb4Q91XZ6 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.46■□□□□ 0.07
Pcdhb4Q91XZ6 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Pcdhb4Q91XZ6 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb4Q91XZ6 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb4Q91XZ6 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.46■□□□□ 0.07
Pcdhb4Q91XZ6 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb4Q91XZ6 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.46■□□□□ 0.07
Pcdhb4Q91XZ6 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb4Q91XZ6 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb4Q91XZ6 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb4Q91XZ6 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb4Q91XZ6 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhb4Q91XZ6 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhb4Q91XZ6 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhb4Q91XZ6 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
Pcdhb4Q91XZ6 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
Pcdhb4Q91XZ6 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhb4Q91XZ6 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhb4Q91XZ6 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb4Q91XZ6 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb4Q91XZ6 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb4Q91XZ6 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb4Q91XZ6 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms