Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgc5Q91XW9 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.71■□□□□ 0.43
Pcdhgc5Q91XW9 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgc5Q91XW9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
Pcdhgc5Q91XW9 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdhgc5Q91XW9 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdhgc5Q91XW9 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhgc5Q91XW9 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.7■□□□□ 0.42
Pcdhgc5Q91XW9 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhgc5Q91XW9 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhgc5Q91XW9 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Pcdhgc5Q91XW9 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhgc5Q91XW9 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC17.7■□□□□ 0.42
Pcdhgc5Q91XW9 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhgc5Q91XW9 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.7■□□□□ 0.42
Pcdhgc5Q91XW9 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.7■□□□□ 0.42
Pcdhgc5Q91XW9 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Pcdhgc5Q91XW9 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhgc5Q91XW9 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhgc5Q91XW9 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhgc5Q91XW9 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.7■□□□□ 0.42
Pcdhgc5Q91XW9 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhgc5Q91XW9 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhgc5Q91XW9 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhgc5Q91XW9 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhgc5Q91XW9 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgc5Q91XW9 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgc5Q91XW9 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgc5Q91XW9 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.69■□□□□ 0.42
Pcdhgc5Q91XW9 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Pcdhgc5Q91XW9 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgc5Q91XW9 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgc5Q91XW9 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgc5Q91XW9 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgc5Q91XW9 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhgc5Q91XW9 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgc5Q91XW9 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgc5Q91XW9 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgc5Q91XW9 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.69■□□□□ 0.42
Pcdhgc5Q91XW9 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgc5Q91XW9 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgc5Q91XW9 Mir8117-201ENSMUST00000184773 107 ntBASIC17.69■□□□□ 0.42
Pcdhgc5Q91XW9 Gm44945-201ENSMUST00000206764 1187 ntBASIC17.69■□□□□ 0.42
Pcdhgc5Q91XW9 Gm15500-202ENSMUST00000071641 1019 ntBASIC17.69■□□□□ 0.42
Pcdhgc5Q91XW9 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgc5Q91XW9 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgc5Q91XW9 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgc5Q91XW9 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgc5Q91XW9 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgc5Q91XW9 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgc5Q91XW9 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgc5Q91XW9 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgc5Q91XW9 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgc5Q91XW9 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgc5Q91XW9 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgc5Q91XW9 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgc5Q91XW9 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Pcdhgc5Q91XW9 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Pcdhgc5Q91XW9 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgc5Q91XW9 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgc5Q91XW9 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdhgc5Q91XW9 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgc5Q91XW9 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgc5Q91XW9 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgc5Q91XW9 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgc5Q91XW9 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Pcdhgc5Q91XW9 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgc5Q91XW9 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgc5Q91XW9 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Pcdhgc5Q91XW9 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdhgc5Q91XW9 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgc5Q91XW9 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgc5Q91XW9 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgc5Q91XW9 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhgc5Q91XW9 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhgc5Q91XW9 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhgc5Q91XW9 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhgc5Q91XW9 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhgc5Q91XW9 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.67■□□□□ 0.42
Pcdhgc5Q91XW9 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhgc5Q91XW9 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhgc5Q91XW9 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.67■□□□□ 0.42
Pcdhgc5Q91XW9 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.67■□□□□ 0.42
Pcdhgc5Q91XW9 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhgc5Q91XW9 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhgc5Q91XW9 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.67■□□□□ 0.42
Pcdhgc5Q91XW9 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhgc5Q91XW9 Gm36967-201ENSMUST00000193814 266 ntBASIC17.67■□□□□ 0.42
Pcdhgc5Q91XW9 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC17.67■□□□□ 0.42
Pcdhgc5Q91XW9 Gm18622-201ENSMUST00000219361 595 ntBASIC17.67■□□□□ 0.42
Pcdhgc5Q91XW9 AC158982.1-201ENSMUST00000228377 901 ntBASIC17.67■□□□□ 0.42
Pcdhgc5Q91XW9 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhgc5Q91XW9 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhgc5Q91XW9 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhgc5Q91XW9 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhgc5Q91XW9 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhgc5Q91XW9 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Pcdhgc5Q91XW9 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Pcdhgc5Q91XW9 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhgc5Q91XW9 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms