Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cspg4Q8VHY0 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.34□□□□□ -0.27
Cspg4Q8VHY0 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC13.34□□□□□ -0.27
Cspg4Q8VHY0 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Cspg4Q8VHY0 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.33□□□□□ -0.27
Cspg4Q8VHY0 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Cspg4Q8VHY0 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cspg4Q8VHY0 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cspg4Q8VHY0 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cspg4Q8VHY0 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cspg4Q8VHY0 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cspg4Q8VHY0 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cspg4Q8VHY0 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cspg4Q8VHY0 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cspg4Q8VHY0 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cspg4Q8VHY0 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cspg4Q8VHY0 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cspg4Q8VHY0 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.33□□□□□ -0.28
Cspg4Q8VHY0 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cspg4Q8VHY0 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cspg4Q8VHY0 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cspg4Q8VHY0 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Cspg4Q8VHY0 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cspg4Q8VHY0 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cspg4Q8VHY0 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cspg4Q8VHY0 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Cspg4Q8VHY0 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Cspg4Q8VHY0 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cspg4Q8VHY0 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.33□□□□□ -0.28
Cspg4Q8VHY0 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cspg4Q8VHY0 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cspg4Q8VHY0 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cspg4Q8VHY0 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cspg4Q8VHY0 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC13.33□□□□□ -0.28
Cspg4Q8VHY0 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.33□□□□□ -0.28
Cspg4Q8VHY0 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Cspg4Q8VHY0 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cspg4Q8VHY0 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cspg4Q8VHY0 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cspg4Q8VHY0 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cspg4Q8VHY0 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cspg4Q8VHY0 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cspg4Q8VHY0 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cspg4Q8VHY0 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.32□□□□□ -0.28
Cspg4Q8VHY0 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cspg4Q8VHY0 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cspg4Q8VHY0 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Cspg4Q8VHY0 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cspg4Q8VHY0 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Cspg4Q8VHY0 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.32□□□□□ -0.28
Cspg4Q8VHY0 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cspg4Q8VHY0 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cspg4Q8VHY0 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cspg4Q8VHY0 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Cspg4Q8VHY0 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.32□□□□□ -0.28
Cspg4Q8VHY0 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cspg4Q8VHY0 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cspg4Q8VHY0 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Cspg4Q8VHY0 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg4Q8VHY0 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg4Q8VHY0 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.31□□□□□ -0.28
Cspg4Q8VHY0 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.31□□□□□ -0.28
Cspg4Q8VHY0 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.31□□□□□ -0.28
Cspg4Q8VHY0 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg4Q8VHY0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Cspg4Q8VHY0 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.31□□□□□ -0.28
Cspg4Q8VHY0 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg4Q8VHY0 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg4Q8VHY0 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg4Q8VHY0 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg4Q8VHY0 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg4Q8VHY0 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg4Q8VHY0 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg4Q8VHY0 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg4Q8VHY0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg4Q8VHY0 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg4Q8VHY0 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg4Q8VHY0 Gm13453-201ENSMUST00000118708 357 ntBASIC13.31□□□□□ -0.28
Cspg4Q8VHY0 Gm15693-201ENSMUST00000120470 637 ntBASIC13.31□□□□□ -0.28
Cspg4Q8VHY0 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.31□□□□□ -0.28
Cspg4Q8VHY0 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg4Q8VHY0 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg4Q8VHY0 Gm6266-201ENSMUST00000203844 806 ntBASIC13.31□□□□□ -0.28
Cspg4Q8VHY0 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.31□□□□□ -0.28
Cspg4Q8VHY0 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg4Q8VHY0 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg4Q8VHY0 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.31□□□□□ -0.28
Cspg4Q8VHY0 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg4Q8VHY0 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg4Q8VHY0 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.31□□□□□ -0.28
Cspg4Q8VHY0 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Cspg4Q8VHY0 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg4Q8VHY0 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg4Q8VHY0 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg4Q8VHY0 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg4Q8VHY0 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg4Q8VHY0 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC13.3□□□□□ -0.28
Cspg4Q8VHY0 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cspg4Q8VHY0 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.3□□□□□ -0.28
Cspg4Q8VHY0 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms