Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Rpa1Q8VEE4 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rpa1Q8VEE4 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpa1Q8VEE4 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpa1Q8VEE4 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rpa1Q8VEE4 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Rpa1Q8VEE4 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpa1Q8VEE4 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpa1Q8VEE4 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpa1Q8VEE4 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.72■□□□□ 0.11
Rpa1Q8VEE4 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpa1Q8VEE4 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpa1Q8VEE4 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rpa1Q8VEE4 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rpa1Q8VEE4 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rpa1Q8VEE4 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Rpa1Q8VEE4 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Rpa1Q8VEE4 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rpa1Q8VEE4 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpa1Q8VEE4 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpa1Q8VEE4 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Rpa1Q8VEE4 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpa1Q8VEE4 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
Rpa1Q8VEE4 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpa1Q8VEE4 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC15.71■□□□□ 0.11
Rpa1Q8VEE4 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.71■□□□□ 0.11
Rpa1Q8VEE4 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpa1Q8VEE4 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpa1Q8VEE4 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Rpa1Q8VEE4 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rpa1Q8VEE4 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpa1Q8VEE4 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpa1Q8VEE4 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpa1Q8VEE4 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Rpa1Q8VEE4 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Rpa1Q8VEE4 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
Rpa1Q8VEE4 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Rpa1Q8VEE4 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rpa1Q8VEE4 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rpa1Q8VEE4 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Rpa1Q8VEE4 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rpa1Q8VEE4 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpa1Q8VEE4 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpa1Q8VEE4 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.7■□□□□ 0.1
Rpa1Q8VEE4 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rpa1Q8VEE4 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpa1Q8VEE4 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpa1Q8VEE4 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpa1Q8VEE4 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpa1Q8VEE4 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpa1Q8VEE4 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpa1Q8VEE4 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpa1Q8VEE4 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.7■□□□□ 0.1
Rpa1Q8VEE4 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rpa1Q8VEE4 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpa1Q8VEE4 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Rpa1Q8VEE4 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rpa1Q8VEE4 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpa1Q8VEE4 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Rpa1Q8VEE4 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpa1Q8VEE4 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpa1Q8VEE4 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.7■□□□□ 0.1
Rpa1Q8VEE4 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Rpa1Q8VEE4 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpa1Q8VEE4 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.69■□□□□ 0.1
Rpa1Q8VEE4 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpa1Q8VEE4 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
Rpa1Q8VEE4 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpa1Q8VEE4 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Rpa1Q8VEE4 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Rpa1Q8VEE4 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rpa1Q8VEE4 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpa1Q8VEE4 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpa1Q8VEE4 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpa1Q8VEE4 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Rpa1Q8VEE4 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpa1Q8VEE4 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpa1Q8VEE4 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpa1Q8VEE4 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rpa1Q8VEE4 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.69■□□□□ 0.1
Rpa1Q8VEE4 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpa1Q8VEE4 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpa1Q8VEE4 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rpa1Q8VEE4 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpa1Q8VEE4 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rpa1Q8VEE4 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpa1Q8VEE4 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpa1Q8VEE4 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpa1Q8VEE4 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpa1Q8VEE4 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpa1Q8VEE4 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Rpa1Q8VEE4 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Rpa1Q8VEE4 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpa1Q8VEE4 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rpa1Q8VEE4 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rpa1Q8VEE4 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpa1Q8VEE4 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpa1Q8VEE4 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpa1Q8VEE4 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpa1Q8VEE4 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms