Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Gm15653-201ENSMUST00000119247 907 ntBASIC16.53■□□□□ 0.24
Lmcd1Q8VEE1 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC16.53■□□□□ 0.24
Lmcd1Q8VEE1 Gm16215-201ENSMUST00000161990 637 ntBASIC16.53■□□□□ 0.24
Lmcd1Q8VEE1 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.53■□□□□ 0.24
Lmcd1Q8VEE1 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC16.53■□□□□ 0.24
Lmcd1Q8VEE1 AC166341.4-201ENSMUST00000220625 123 ntBASIC16.53■□□□□ 0.24
Lmcd1Q8VEE1 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lmcd1Q8VEE1 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lmcd1Q8VEE1 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lmcd1Q8VEE1 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lmcd1Q8VEE1 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lmcd1Q8VEE1 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lmcd1Q8VEE1 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lmcd1Q8VEE1 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Lmcd1Q8VEE1 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lmcd1Q8VEE1 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lmcd1Q8VEE1 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Lmcd1Q8VEE1 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lmcd1Q8VEE1 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Lmcd1Q8VEE1 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lmcd1Q8VEE1 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Lmcd1Q8VEE1 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Lmcd1Q8VEE1 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lmcd1Q8VEE1 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lmcd1Q8VEE1 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Lmcd1Q8VEE1 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lmcd1Q8VEE1 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lmcd1Q8VEE1 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lmcd1Q8VEE1 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.52■□□□□ 0.24
Lmcd1Q8VEE1 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC16.52■□□□□ 0.24
Lmcd1Q8VEE1 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC16.52■□□□□ 0.24
Lmcd1Q8VEE1 Gm44855-201ENSMUST00000205725 362 ntBASIC16.52■□□□□ 0.24
Lmcd1Q8VEE1 AC125350.2-201ENSMUST00000224737 727 ntBASIC16.52■□□□□ 0.24
Lmcd1Q8VEE1 Rbfox2-208ENSMUST00000227930 1218 ntBASIC16.52■□□□□ 0.24
Lmcd1Q8VEE1 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lmcd1Q8VEE1 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.52■□□□□ 0.24
Lmcd1Q8VEE1 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Lmcd1Q8VEE1 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lmcd1Q8VEE1 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Lmcd1Q8VEE1 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.52■□□□□ 0.23
Lmcd1Q8VEE1 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Lmcd1Q8VEE1 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC16.52■□□□□ 0.23
Lmcd1Q8VEE1 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Lmcd1Q8VEE1 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lmcd1Q8VEE1 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lmcd1Q8VEE1 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lmcd1Q8VEE1 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lmcd1Q8VEE1 Syt7-204ENSMUST00000223586 1344 ntBASIC16.51■□□□□ 0.23
Lmcd1Q8VEE1 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lmcd1Q8VEE1 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lmcd1Q8VEE1 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lmcd1Q8VEE1 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lmcd1Q8VEE1 Gm8410-201ENSMUST00000117225 605 ntBASIC16.51■□□□□ 0.23
Lmcd1Q8VEE1 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC16.51■□□□□ 0.23
Lmcd1Q8VEE1 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC16.51■□□□□ 0.23
Lmcd1Q8VEE1 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lmcd1Q8VEE1 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Lmcd1Q8VEE1 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Lmcd1Q8VEE1 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC16.51■□□□□ 0.23
Lmcd1Q8VEE1 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lmcd1Q8VEE1 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lmcd1Q8VEE1 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lmcd1Q8VEE1 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lmcd1Q8VEE1 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.51■□□□□ 0.23
Lmcd1Q8VEE1 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lmcd1Q8VEE1 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lmcd1Q8VEE1 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lmcd1Q8VEE1 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lmcd1Q8VEE1 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lmcd1Q8VEE1 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lmcd1Q8VEE1 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lmcd1Q8VEE1 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.5■□□□□ 0.23
Lmcd1Q8VEE1 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lmcd1Q8VEE1 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC16.5■□□□□ 0.23
Lmcd1Q8VEE1 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lmcd1Q8VEE1 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lmcd1Q8VEE1 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lmcd1Q8VEE1 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC16.5■□□□□ 0.23
Lmcd1Q8VEE1 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC16.5■□□□□ 0.23
Lmcd1Q8VEE1 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC16.5■□□□□ 0.23
Lmcd1Q8VEE1 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Lmcd1Q8VEE1 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Lmcd1Q8VEE1 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16.5■□□□□ 0.23
Lmcd1Q8VEE1 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Lmcd1Q8VEE1 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16.5■□□□□ 0.23
Lmcd1Q8VEE1 AC132863.2-201ENSMUST00000226643 799 ntBASIC16.5■□□□□ 0.23
Lmcd1Q8VEE1 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lmcd1Q8VEE1 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lmcd1Q8VEE1 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lmcd1Q8VEE1 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
Lmcd1Q8VEE1 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.5■□□□□ 0.23
Lmcd1Q8VEE1 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lmcd1Q8VEE1 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Lmcd1Q8VEE1 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lmcd1Q8VEE1 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Lmcd1Q8VEE1 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lmcd1Q8VEE1 Gm15163-201ENSMUST00000120749 1302 ntBASIC16.49■□□□□ 0.23
Lmcd1Q8VEE1 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lmcd1Q8VEE1 Gm3365-201ENSMUST00000216296 1480 ntBASIC16.49■□□□□ 0.23
Lmcd1Q8VEE1 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms