Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx39aQ8VDW0 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.26■□□□□ 0.35
Ddx39aQ8VDW0 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx39aQ8VDW0 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx39aQ8VDW0 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx39aQ8VDW0 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx39aQ8VDW0 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx39aQ8VDW0 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx39aQ8VDW0 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.26■□□□□ 0.35
Ddx39aQ8VDW0 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.25■□□□□ 0.35
Ddx39aQ8VDW0 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx39aQ8VDW0 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx39aQ8VDW0 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx39aQ8VDW0 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx39aQ8VDW0 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx39aQ8VDW0 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx39aQ8VDW0 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx39aQ8VDW0 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ddx39aQ8VDW0 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Ddx39aQ8VDW0 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx39aQ8VDW0 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Ddx39aQ8VDW0 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx39aQ8VDW0 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.25■□□□□ 0.35
Ddx39aQ8VDW0 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx39aQ8VDW0 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.25■□□□□ 0.35
Ddx39aQ8VDW0 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx39aQ8VDW0 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx39aQ8VDW0 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx39aQ8VDW0 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.25■□□□□ 0.35
Ddx39aQ8VDW0 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx39aQ8VDW0 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx39aQ8VDW0 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx39aQ8VDW0 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ddx39aQ8VDW0 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ddx39aQ8VDW0 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx39aQ8VDW0 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx39aQ8VDW0 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx39aQ8VDW0 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx39aQ8VDW0 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.24■□□□□ 0.35
Ddx39aQ8VDW0 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.24■□□□□ 0.35
Ddx39aQ8VDW0 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx39aQ8VDW0 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx39aQ8VDW0 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx39aQ8VDW0 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Ddx39aQ8VDW0 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx39aQ8VDW0 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx39aQ8VDW0 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx39aQ8VDW0 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.24■□□□□ 0.35
Ddx39aQ8VDW0 Gm13597-201ENSMUST00000121239 375 ntBASIC17.24■□□□□ 0.35
Ddx39aQ8VDW0 Gm17271-201ENSMUST00000165535 355 ntBASIC17.24■□□□□ 0.35
Ddx39aQ8VDW0 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.24■□□□□ 0.35
Ddx39aQ8VDW0 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC17.24■□□□□ 0.35
Ddx39aQ8VDW0 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC17.24■□□□□ 0.35
Ddx39aQ8VDW0 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ddx39aQ8VDW0 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx39aQ8VDW0 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.24■□□□□ 0.35
Ddx39aQ8VDW0 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx39aQ8VDW0 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx39aQ8VDW0 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx39aQ8VDW0 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx39aQ8VDW0 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ddx39aQ8VDW0 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx39aQ8VDW0 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Ddx39aQ8VDW0 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx39aQ8VDW0 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx39aQ8VDW0 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx39aQ8VDW0 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ddx39aQ8VDW0 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx39aQ8VDW0 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx39aQ8VDW0 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx39aQ8VDW0 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx39aQ8VDW0 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx39aQ8VDW0 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx39aQ8VDW0 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx39aQ8VDW0 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx39aQ8VDW0 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx39aQ8VDW0 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.23■□□□□ 0.35
Ddx39aQ8VDW0 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ddx39aQ8VDW0 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.23■□□□□ 0.35
Ddx39aQ8VDW0 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.23■□□□□ 0.35
Ddx39aQ8VDW0 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx39aQ8VDW0 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx39aQ8VDW0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Ddx39aQ8VDW0 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx39aQ8VDW0 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.23■□□□□ 0.35
Ddx39aQ8VDW0 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Ddx39aQ8VDW0 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx39aQ8VDW0 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx39aQ8VDW0 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.23■□□□□ 0.35
Ddx39aQ8VDW0 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx39aQ8VDW0 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx39aQ8VDW0 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Ddx39aQ8VDW0 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx39aQ8VDW0 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx39aQ8VDW0 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx39aQ8VDW0 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Ddx39aQ8VDW0 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC17.22■□□□□ 0.35
Ddx39aQ8VDW0 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx39aQ8VDW0 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx39aQ8VDW0 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms