Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf8Q8VC56 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf8Q8VC56 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf8Q8VC56 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rnf8Q8VC56 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.04■□□□□ -0
Rnf8Q8VC56 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf8Q8VC56 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf8Q8VC56 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf8Q8VC56 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf8Q8VC56 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rnf8Q8VC56 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rnf8Q8VC56 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rnf8Q8VC56 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf8Q8VC56 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rnf8Q8VC56 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.04■□□□□ -0
Rnf8Q8VC56 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.04■□□□□ -0
Rnf8Q8VC56 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf8Q8VC56 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rnf8Q8VC56 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.04■□□□□ -0
Rnf8Q8VC56 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.04■□□□□ -0
Rnf8Q8VC56 Gm10052-201ENSMUST00000168019 960 ntBASIC15.04■□□□□ -0
Rnf8Q8VC56 Gm27357-201ENSMUST00000183754 135 ntBASIC15.04■□□□□ -0
Rnf8Q8VC56 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf8Q8VC56 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf8Q8VC56 Gm7729-201ENSMUST00000050143 801 ntBASIC15.04■□□□□ -0
Rnf8Q8VC56 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.04■□□□□ -0
Rnf8Q8VC56 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rnf8Q8VC56 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf8Q8VC56 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf8Q8VC56 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rnf8Q8VC56 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.03■□□□□ -0
Rnf8Q8VC56 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf8Q8VC56 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf8Q8VC56 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf8Q8VC56 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.03■□□□□ -0
Rnf8Q8VC56 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rnf8Q8VC56 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.03■□□□□ -0
Rnf8Q8VC56 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf8Q8VC56 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf8Q8VC56 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rnf8Q8VC56 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf8Q8VC56 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf8Q8VC56 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf8Q8VC56 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Rnf8Q8VC56 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf8Q8VC56 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.03■□□□□ -0
Rnf8Q8VC56 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf8Q8VC56 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf8Q8VC56 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf8Q8VC56 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf8Q8VC56 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rnf8Q8VC56 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf8Q8VC56 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.03■□□□□ -0
Rnf8Q8VC56 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf8Q8VC56 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rnf8Q8VC56 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.02■□□□□ -0
Rnf8Q8VC56 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.02■□□□□ -0
Rnf8Q8VC56 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.02■□□□□ -0
Rnf8Q8VC56 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Rnf8Q8VC56 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Rnf8Q8VC56 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rnf8Q8VC56 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Rnf8Q8VC56 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rnf8Q8VC56 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rnf8Q8VC56 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rnf8Q8VC56 Gm44430-201ENSMUST00000203376 995 ntBASIC15.02■□□□□ -0
Rnf8Q8VC56 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rnf8Q8VC56 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rnf8Q8VC56 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rnf8Q8VC56 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Rnf8Q8VC56 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rnf8Q8VC56 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Rnf8Q8VC56 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rnf8Q8VC56 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rnf8Q8VC56 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Rnf8Q8VC56 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rnf8Q8VC56 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rnf8Q8VC56 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Rnf8Q8VC56 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Rnf8Q8VC56 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.01□□□□□ -0.01
Rnf8Q8VC56 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Rnf8Q8VC56 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Rnf8Q8VC56 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf8Q8VC56 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf8Q8VC56 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf8Q8VC56 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf8Q8VC56 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf8Q8VC56 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf8Q8VC56 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf8Q8VC56 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Rnf8Q8VC56 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf8Q8VC56 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf8Q8VC56 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf8Q8VC56 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Rnf8Q8VC56 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf8Q8VC56 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf8Q8VC56 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.01□□□□□ -0.01
Rnf8Q8VC56 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf8Q8VC56 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf8Q8VC56 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms