Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nup35Q8R4R6 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.73□□□□□ -0.37
Nup35Q8R4R6 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nup35Q8R4R6 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nup35Q8R4R6 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup35Q8R4R6 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Nup35Q8R4R6 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nup35Q8R4R6 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup35Q8R4R6 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup35Q8R4R6 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup35Q8R4R6 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup35Q8R4R6 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup35Q8R4R6 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup35Q8R4R6 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC12.72□□□□□ -0.37
Nup35Q8R4R6 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.72□□□□□ -0.37
Nup35Q8R4R6 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.72□□□□□ -0.37
Nup35Q8R4R6 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup35Q8R4R6 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup35Q8R4R6 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup35Q8R4R6 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup35Q8R4R6 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup35Q8R4R6 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.72□□□□□ -0.37
Nup35Q8R4R6 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup35Q8R4R6 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.72□□□□□ -0.37
Nup35Q8R4R6 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup35Q8R4R6 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup35Q8R4R6 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.72□□□□□ -0.37
Nup35Q8R4R6 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup35Q8R4R6 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.72□□□□□ -0.37
Nup35Q8R4R6 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup35Q8R4R6 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup35Q8R4R6 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nup35Q8R4R6 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.71□□□□□ -0.37
Nup35Q8R4R6 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.71□□□□□ -0.37
Nup35Q8R4R6 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nup35Q8R4R6 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.71□□□□□ -0.37
Nup35Q8R4R6 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Nup35Q8R4R6 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nup35Q8R4R6 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nup35Q8R4R6 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Nup35Q8R4R6 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.71□□□□□ -0.37
Nup35Q8R4R6 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nup35Q8R4R6 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nup35Q8R4R6 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nup35Q8R4R6 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.71□□□□□ -0.37
Nup35Q8R4R6 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC12.71□□□□□ -0.37
Nup35Q8R4R6 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nup35Q8R4R6 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Nup35Q8R4R6 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Nup35Q8R4R6 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nup35Q8R4R6 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nup35Q8R4R6 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nup35Q8R4R6 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nup35Q8R4R6 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nup35Q8R4R6 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.71□□□□□ -0.38
Nup35Q8R4R6 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nup35Q8R4R6 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nup35Q8R4R6 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nup35Q8R4R6 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Nup35Q8R4R6 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup35Q8R4R6 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nup35Q8R4R6 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.7□□□□□ -0.38
Nup35Q8R4R6 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.7□□□□□ -0.38
Nup35Q8R4R6 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup35Q8R4R6 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Nup35Q8R4R6 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup35Q8R4R6 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup35Q8R4R6 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup35Q8R4R6 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nup35Q8R4R6 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup35Q8R4R6 Gm8520-201ENSMUST00000186517 868 ntBASIC12.7□□□□□ -0.38
Nup35Q8R4R6 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.7□□□□□ -0.38
Nup35Q8R4R6 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.7□□□□□ -0.38
Nup35Q8R4R6 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nup35Q8R4R6 Gm5417-201ENSMUST00000079706 384 ntBASIC12.7□□□□□ -0.38
Nup35Q8R4R6 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup35Q8R4R6 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup35Q8R4R6 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Nup35Q8R4R6 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup35Q8R4R6 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup35Q8R4R6 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Nup35Q8R4R6 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup35Q8R4R6 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.7□□□□□ -0.38
Nup35Q8R4R6 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup35Q8R4R6 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup35Q8R4R6 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup35Q8R4R6 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup35Q8R4R6 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup35Q8R4R6 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup35Q8R4R6 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup35Q8R4R6 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.69□□□□□ -0.38
Nup35Q8R4R6 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup35Q8R4R6 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup35Q8R4R6 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup35Q8R4R6 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup35Q8R4R6 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup35Q8R4R6 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup35Q8R4R6 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nup35Q8R4R6 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup35Q8R4R6 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms