Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col23a1Q8K4G2 Rassf8-202ENSMUST00000058538 1131 ntBASIC18.75■□□□□ 0.59
Col23a1Q8K4G2 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col23a1Q8K4G2 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col23a1Q8K4G2 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col23a1Q8K4G2 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.75■□□□□ 0.59
Col23a1Q8K4G2 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col23a1Q8K4G2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col23a1Q8K4G2 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC18.74■□□□□ 0.59
Col23a1Q8K4G2 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col23a1Q8K4G2 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col23a1Q8K4G2 Gm14042-201ENSMUST00000120139 833 ntBASIC18.74■□□□□ 0.59
Col23a1Q8K4G2 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC18.74■□□□□ 0.59
Col23a1Q8K4G2 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col23a1Q8K4G2 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col23a1Q8K4G2 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC18.74■□□□□ 0.59
Col23a1Q8K4G2 Ighv8-7-201ENSMUST00000194349 297 ntBASIC18.74■□□□□ 0.59
Col23a1Q8K4G2 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col23a1Q8K4G2 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col23a1Q8K4G2 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col23a1Q8K4G2 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col23a1Q8K4G2 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col23a1Q8K4G2 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col23a1Q8K4G2 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col23a1Q8K4G2 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Col23a1Q8K4G2 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col23a1Q8K4G2 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col23a1Q8K4G2 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.74■□□□□ 0.59
Col23a1Q8K4G2 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col23a1Q8K4G2 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col23a1Q8K4G2 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col23a1Q8K4G2 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col23a1Q8K4G2 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col23a1Q8K4G2 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col23a1Q8K4G2 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col23a1Q8K4G2 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col23a1Q8K4G2 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col23a1Q8K4G2 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col23a1Q8K4G2 Gm15653-201ENSMUST00000119247 907 ntBASIC18.73■□□□□ 0.59
Col23a1Q8K4G2 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC18.73■□□□□ 0.59
Col23a1Q8K4G2 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Col23a1Q8K4G2 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC18.73■□□□□ 0.59
Col23a1Q8K4G2 Gm18018-201ENSMUST00000198273 408 ntBASIC18.73■□□□□ 0.59
Col23a1Q8K4G2 Gm43630-201ENSMUST00000201550 776 ntBASIC18.73■□□□□ 0.59
Col23a1Q8K4G2 Shd-206ENSMUST00000225145 998 ntBASIC18.73■□□□□ 0.59
Col23a1Q8K4G2 AC238811.1-201ENSMUST00000225302 441 ntBASIC18.73■□□□□ 0.59
Col23a1Q8K4G2 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col23a1Q8K4G2 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Col23a1Q8K4G2 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Col23a1Q8K4G2 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Col23a1Q8K4G2 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col23a1Q8K4G2 Gm7669-201ENSMUST00000210184 1603 ntBASIC18.73■□□□□ 0.59
Col23a1Q8K4G2 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col23a1Q8K4G2 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col23a1Q8K4G2 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col23a1Q8K4G2 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col23a1Q8K4G2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.73■□□□□ 0.59
Col23a1Q8K4G2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col23a1Q8K4G2 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.73■□□□□ 0.59
Col23a1Q8K4G2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.73■□□□□ 0.59
Col23a1Q8K4G2 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col23a1Q8K4G2 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col23a1Q8K4G2 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col23a1Q8K4G2 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col23a1Q8K4G2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Col23a1Q8K4G2 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC18.72■□□□□ 0.59
Col23a1Q8K4G2 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col23a1Q8K4G2 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col23a1Q8K4G2 Gm12091-201ENSMUST00000146791 830 ntBASIC18.72■□□□□ 0.59
Col23a1Q8K4G2 Mir1938-201ENSMUST00000158746 100 ntBASIC18.72■□□□□ 0.59
Col23a1Q8K4G2 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col23a1Q8K4G2 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col23a1Q8K4G2 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col23a1Q8K4G2 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC18.72■□□□□ 0.59
Col23a1Q8K4G2 Klk2-ps-201ENSMUST00000205342 571 ntBASIC18.72■□□□□ 0.59
Col23a1Q8K4G2 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col23a1Q8K4G2 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Col23a1Q8K4G2 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col23a1Q8K4G2 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Col23a1Q8K4G2 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col23a1Q8K4G2 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col23a1Q8K4G2 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col23a1Q8K4G2 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col23a1Q8K4G2 Gm42466-201ENSMUST00000202099 1301 ntBASIC18.72■□□□□ 0.59
Col23a1Q8K4G2 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
Col23a1Q8K4G2 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Col23a1Q8K4G2 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col23a1Q8K4G2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col23a1Q8K4G2 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Col23a1Q8K4G2 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.71■□□□□ 0.59
Col23a1Q8K4G2 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Col23a1Q8K4G2 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
Col23a1Q8K4G2 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Col23a1Q8K4G2 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col23a1Q8K4G2 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col23a1Q8K4G2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col23a1Q8K4G2 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col23a1Q8K4G2 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col23a1Q8K4G2 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Col23a1Q8K4G2 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms