Protein–RNA interactions for Protein: Q8JZK6

Trim61, MCG22896, isoform CRA_b, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61Q8JZK6 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim61Q8JZK6 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim61Q8JZK6 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.34■□□□□ 0.21
Trim61Q8JZK6 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim61Q8JZK6 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trim61Q8JZK6 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Trim61Q8JZK6 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trim61Q8JZK6 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC16.33■□□□□ 0.2
Trim61Q8JZK6 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim61Q8JZK6 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim61Q8JZK6 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim61Q8JZK6 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.33■□□□□ 0.2
Trim61Q8JZK6 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim61Q8JZK6 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trim61Q8JZK6 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC16.33■□□□□ 0.2
Trim61Q8JZK6 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Trim61Q8JZK6 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.33■□□□□ 0.2
Trim61Q8JZK6 Chchd1-203ENSMUST00000224633 557 ntBASIC16.33■□□□□ 0.2
Trim61Q8JZK6 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.33■□□□□ 0.2
Trim61Q8JZK6 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim61Q8JZK6 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim61Q8JZK6 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.33■□□□□ 0.2
Trim61Q8JZK6 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim61Q8JZK6 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim61Q8JZK6 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.33■□□□□ 0.2
Trim61Q8JZK6 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim61Q8JZK6 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim61Q8JZK6 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Trim61Q8JZK6 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim61Q8JZK6 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim61Q8JZK6 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trim61Q8JZK6 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.33■□□□□ 0.2
Trim61Q8JZK6 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trim61Q8JZK6 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Trim61Q8JZK6 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Trim61Q8JZK6 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim61Q8JZK6 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim61Q8JZK6 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Trim61Q8JZK6 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim61Q8JZK6 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.32■□□□□ 0.2
Trim61Q8JZK6 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim61Q8JZK6 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim61Q8JZK6 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim61Q8JZK6 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim61Q8JZK6 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim61Q8JZK6 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim61Q8JZK6 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim61Q8JZK6 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim61Q8JZK6 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Trim61Q8JZK6 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trim61Q8JZK6 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim61Q8JZK6 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.31■□□□□ 0.2
Trim61Q8JZK6 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim61Q8JZK6 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim61Q8JZK6 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim61Q8JZK6 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim61Q8JZK6 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trim61Q8JZK6 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trim61Q8JZK6 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim61Q8JZK6 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Trim61Q8JZK6 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.31■□□□□ 0.2
Trim61Q8JZK6 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.31■□□□□ 0.2
Trim61Q8JZK6 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.31■□□□□ 0.2
Trim61Q8JZK6 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim61Q8JZK6 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim61Q8JZK6 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim61Q8JZK6 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim61Q8JZK6 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim61Q8JZK6 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Trim61Q8JZK6 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim61Q8JZK6 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.3■□□□□ 0.2
Trim61Q8JZK6 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim61Q8JZK6 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim61Q8JZK6 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim61Q8JZK6 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim61Q8JZK6 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim61Q8JZK6 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim61Q8JZK6 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.3■□□□□ 0.2
Trim61Q8JZK6 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.3■□□□□ 0.2
Trim61Q8JZK6 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim61Q8JZK6 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.3■□□□□ 0.2
Trim61Q8JZK6 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.3■□□□□ 0.2
Trim61Q8JZK6 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim61Q8JZK6 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC16.3■□□□□ 0.2
Trim61Q8JZK6 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim61Q8JZK6 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim61Q8JZK6 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim61Q8JZK6 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim61Q8JZK6 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim61Q8JZK6 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.3■□□□□ 0.2
Trim61Q8JZK6 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim61Q8JZK6 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim61Q8JZK6 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim61Q8JZK6 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim61Q8JZK6 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim61Q8JZK6 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim61Q8JZK6 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim61Q8JZK6 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim61Q8JZK6 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim61Q8JZK6 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms