Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CroccQ8CJ40 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CroccQ8CJ40 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CroccQ8CJ40 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CroccQ8CJ40 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CroccQ8CJ40 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CroccQ8CJ40 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CroccQ8CJ40 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CroccQ8CJ40 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CroccQ8CJ40 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CroccQ8CJ40 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.89□□□□□ -0.03
CroccQ8CJ40 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.89□□□□□ -0.03
CroccQ8CJ40 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CroccQ8CJ40 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CroccQ8CJ40 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CroccQ8CJ40 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CroccQ8CJ40 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CroccQ8CJ40 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CroccQ8CJ40 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CroccQ8CJ40 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CroccQ8CJ40 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CroccQ8CJ40 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CroccQ8CJ40 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CroccQ8CJ40 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.88□□□□□ -0.03
CroccQ8CJ40 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.88□□□□□ -0.03
CroccQ8CJ40 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.88□□□□□ -0.03
CroccQ8CJ40 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CroccQ8CJ40 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CroccQ8CJ40 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CroccQ8CJ40 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CroccQ8CJ40 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CroccQ8CJ40 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.88□□□□□ -0.03
CroccQ8CJ40 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.88□□□□□ -0.03
CroccQ8CJ40 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CroccQ8CJ40 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.88□□□□□ -0.03
CroccQ8CJ40 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CroccQ8CJ40 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CroccQ8CJ40 Rps4l-201ENSMUST00000071745 943 ntBASIC14.88□□□□□ -0.03
CroccQ8CJ40 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CroccQ8CJ40 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.88□□□□□ -0.03
CroccQ8CJ40 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CroccQ8CJ40 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CroccQ8CJ40 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.88□□□□□ -0.03
CroccQ8CJ40 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CroccQ8CJ40 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CroccQ8CJ40 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.87□□□□□ -0.03
CroccQ8CJ40 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CroccQ8CJ40 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CroccQ8CJ40 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CroccQ8CJ40 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CroccQ8CJ40 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CroccQ8CJ40 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CroccQ8CJ40 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.87□□□□□ -0.03
CroccQ8CJ40 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CroccQ8CJ40 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CroccQ8CJ40 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CroccQ8CJ40 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CroccQ8CJ40 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CroccQ8CJ40 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CroccQ8CJ40 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CroccQ8CJ40 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CroccQ8CJ40 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CroccQ8CJ40 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CroccQ8CJ40 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CroccQ8CJ40 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CroccQ8CJ40 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CroccQ8CJ40 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CroccQ8CJ40 Gm7153-201ENSMUST00000117092 455 ntBASIC14.87□□□□□ -0.03
CroccQ8CJ40 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
CroccQ8CJ40 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.87□□□□□ -0.03
CroccQ8CJ40 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.87□□□□□ -0.03
CroccQ8CJ40 Gm8655-201ENSMUST00000221159 852 ntBASIC14.87□□□□□ -0.03
CroccQ8CJ40 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CroccQ8CJ40 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CroccQ8CJ40 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CroccQ8CJ40 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CroccQ8CJ40 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CroccQ8CJ40 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CroccQ8CJ40 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CroccQ8CJ40 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CroccQ8CJ40 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CroccQ8CJ40 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.86□□□□□ -0.03
CroccQ8CJ40 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CroccQ8CJ40 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CroccQ8CJ40 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
CroccQ8CJ40 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CroccQ8CJ40 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CroccQ8CJ40 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CroccQ8CJ40 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.86□□□□□ -0.03
CroccQ8CJ40 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.86□□□□□ -0.03
CroccQ8CJ40 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.86□□□□□ -0.03
CroccQ8CJ40 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.86□□□□□ -0.03
CroccQ8CJ40 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
CroccQ8CJ40 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CroccQ8CJ40 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CroccQ8CJ40 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CroccQ8CJ40 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CroccQ8CJ40 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CroccQ8CJ40 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CroccQ8CJ40 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms