Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Syne4Q8CII8 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.56■□□□□ 0.4
Syne4Q8CII8 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.56■□□□□ 0.4
Syne4Q8CII8 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.56■□□□□ 0.4
Syne4Q8CII8 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Syne4Q8CII8 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Syne4Q8CII8 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.56■□□□□ 0.4
Syne4Q8CII8 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.56■□□□□ 0.4
Syne4Q8CII8 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Syne4Q8CII8 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.56■□□□□ 0.4
Syne4Q8CII8 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC17.56■□□□□ 0.4
Syne4Q8CII8 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC17.56■□□□□ 0.4
Syne4Q8CII8 AC140375.2-201ENSMUST00000225283 584 ntBASIC17.56■□□□□ 0.4
Syne4Q8CII8 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Syne4Q8CII8 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.56■□□□□ 0.4
Syne4Q8CII8 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Syne4Q8CII8 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Syne4Q8CII8 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Syne4Q8CII8 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Syne4Q8CII8 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Syne4Q8CII8 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Syne4Q8CII8 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Syne4Q8CII8 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Syne4Q8CII8 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Syne4Q8CII8 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Syne4Q8CII8 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Syne4Q8CII8 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Syne4Q8CII8 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Syne4Q8CII8 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Syne4Q8CII8 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Syne4Q8CII8 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Syne4Q8CII8 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC17.55■□□□□ 0.4
Syne4Q8CII8 Gm12151-201ENSMUST00000121374 290 ntBASIC17.55■□□□□ 0.4
Syne4Q8CII8 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC17.55■□□□□ 0.4
Syne4Q8CII8 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Syne4Q8CII8 Gm5866-201ENSMUST00000177881 973 ntBASIC17.55■□□□□ 0.4
Syne4Q8CII8 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Syne4Q8CII8 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC17.55■□□□□ 0.4
Syne4Q8CII8 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.55■□□□□ 0.4
Syne4Q8CII8 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Syne4Q8CII8 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Syne4Q8CII8 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Syne4Q8CII8 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Syne4Q8CII8 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Syne4Q8CII8 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Syne4Q8CII8 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Syne4Q8CII8 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Syne4Q8CII8 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Syne4Q8CII8 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Syne4Q8CII8 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Syne4Q8CII8 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Syne4Q8CII8 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Syne4Q8CII8 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Syne4Q8CII8 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Syne4Q8CII8 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Syne4Q8CII8 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Syne4Q8CII8 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Syne4Q8CII8 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Syne4Q8CII8 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Syne4Q8CII8 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Syne4Q8CII8 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Syne4Q8CII8 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Syne4Q8CII8 Gm11424-201ENSMUST00000121929 829 ntBASIC17.54■□□□□ 0.4
Syne4Q8CII8 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Syne4Q8CII8 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.54■□□□□ 0.4
Syne4Q8CII8 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Syne4Q8CII8 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Syne4Q8CII8 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Syne4Q8CII8 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Syne4Q8CII8 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Syne4Q8CII8 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Syne4Q8CII8 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Syne4Q8CII8 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Syne4Q8CII8 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Syne4Q8CII8 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Syne4Q8CII8 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Syne4Q8CII8 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Syne4Q8CII8 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Syne4Q8CII8 Gm6973-201ENSMUST00000117080 721 ntBASIC17.53■□□□□ 0.4
Syne4Q8CII8 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Syne4Q8CII8 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Syne4Q8CII8 Gm43438-201ENSMUST00000198133 379 ntBASIC17.53■□□□□ 0.4
Syne4Q8CII8 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Syne4Q8CII8 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Syne4Q8CII8 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Syne4Q8CII8 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Syne4Q8CII8 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Syne4Q8CII8 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Syne4Q8CII8 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Syne4Q8CII8 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Syne4Q8CII8 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Syne4Q8CII8 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.53■□□□□ 0.4
Syne4Q8CII8 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.53■□□□□ 0.4
Syne4Q8CII8 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Syne4Q8CII8 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Syne4Q8CII8 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Syne4Q8CII8 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Syne4Q8CII8 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Syne4Q8CII8 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Syne4Q8CII8 Gm13223-201ENSMUST00000118609 747 ntBASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms