Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Smc4Q8CG47 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC19.15■□□□□ 0.66
Smc4Q8CG47 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Smc4Q8CG47 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smc4Q8CG47 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc4Q8CG47 Gm5366-201ENSMUST00000215494 1338 ntBASIC19.15■□□□□ 0.66
Smc4Q8CG47 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smc4Q8CG47 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc4Q8CG47 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.15■□□□□ 0.66
Smc4Q8CG47 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc4Q8CG47 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc4Q8CG47 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc4Q8CG47 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
Smc4Q8CG47 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc4Q8CG47 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc4Q8CG47 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
Smc4Q8CG47 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc4Q8CG47 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc4Q8CG47 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Smc4Q8CG47 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Smc4Q8CG47 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Smc4Q8CG47 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Smc4Q8CG47 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Smc4Q8CG47 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Smc4Q8CG47 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Smc4Q8CG47 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Smc4Q8CG47 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Smc4Q8CG47 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Smc4Q8CG47 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smc4Q8CG47 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smc4Q8CG47 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Smc4Q8CG47 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smc4Q8CG47 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC19.14■□□□□ 0.65
Smc4Q8CG47 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC19.14■□□□□ 0.65
Smc4Q8CG47 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Smc4Q8CG47 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC19.14■□□□□ 0.65
Smc4Q8CG47 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smc4Q8CG47 AC174742.1-201ENSMUST00000218272 304 ntBASIC19.14■□□□□ 0.65
Smc4Q8CG47 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smc4Q8CG47 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Smc4Q8CG47 Gm26917-202ENSMUST00000192833 3329 ntBASIC19.14■□□□□ 0.65
Smc4Q8CG47 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smc4Q8CG47 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smc4Q8CG47 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smc4Q8CG47 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smc4Q8CG47 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc4Q8CG47 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Smc4Q8CG47 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc4Q8CG47 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Smc4Q8CG47 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
Smc4Q8CG47 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc4Q8CG47 Gm11453-201ENSMUST00000117318 1007 ntBASIC19.13■□□□□ 0.65
Smc4Q8CG47 Mir3113-201ENSMUST00000175478 76 ntBASIC19.13■□□□□ 0.65
Smc4Q8CG47 CT943659.1-201ENSMUST00000215459 326 ntBASIC19.13■□□□□ 0.65
Smc4Q8CG47 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc4Q8CG47 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc4Q8CG47 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc4Q8CG47 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Smc4Q8CG47 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC19.13■□□□□ 0.65
Smc4Q8CG47 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
Smc4Q8CG47 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc4Q8CG47 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc4Q8CG47 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Smc4Q8CG47 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc4Q8CG47 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Smc4Q8CG47 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc4Q8CG47 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc4Q8CG47 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Smc4Q8CG47 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc4Q8CG47 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Smc4Q8CG47 AC157650.3-201ENSMUST00000225058 1476 ntBASIC19.12■□□□□ 0.65
Smc4Q8CG47 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc4Q8CG47 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Smc4Q8CG47 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Smc4Q8CG47 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc4Q8CG47 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC19.12■□□□□ 0.65
Smc4Q8CG47 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc4Q8CG47 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc4Q8CG47 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Smc4Q8CG47 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.12■□□□□ 0.65
Smc4Q8CG47 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc4Q8CG47 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc4Q8CG47 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Smc4Q8CG47 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smc4Q8CG47 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Smc4Q8CG47 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Smc4Q8CG47 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smc4Q8CG47 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smc4Q8CG47 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smc4Q8CG47 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smc4Q8CG47 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smc4Q8CG47 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC19.11■□□□□ 0.65
Smc4Q8CG47 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC19.11■□□□□ 0.65
Smc4Q8CG47 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smc4Q8CG47 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC19.11■□□□□ 0.65
Smc4Q8CG47 Gm2756-201ENSMUST00000195851 400 ntBASIC19.11■□□□□ 0.65
Smc4Q8CG47 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Smc4Q8CG47 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Smc4Q8CG47 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC19.11■□□□□ 0.65
Smc4Q8CG47 AC160980.1-201ENSMUST00000224136 970 ntBASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms