Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC18.12■□□□□ 0.49
Alx1Q8C8B0 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC18.12■□□□□ 0.49
Alx1Q8C8B0 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC18.12■□□□□ 0.49
Alx1Q8C8B0 Gm18206-201ENSMUST00000207027 926 ntBASIC18.12■□□□□ 0.49
Alx1Q8C8B0 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Alx1Q8C8B0 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
Alx1Q8C8B0 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Alx1Q8C8B0 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Alx1Q8C8B0 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Alx1Q8C8B0 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Alx1Q8C8B0 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Alx1Q8C8B0 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Alx1Q8C8B0 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Alx1Q8C8B0 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Alx1Q8C8B0 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.12■□□□□ 0.49
Alx1Q8C8B0 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Alx1Q8C8B0 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Alx1Q8C8B0 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Alx1Q8C8B0 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Alx1Q8C8B0 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Alx1Q8C8B0 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Alx1Q8C8B0 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Alx1Q8C8B0 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Alx1Q8C8B0 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Alx1Q8C8B0 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Alx1Q8C8B0 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Alx1Q8C8B0 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Alx1Q8C8B0 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Alx1Q8C8B0 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Alx1Q8C8B0 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC18.11■□□□□ 0.49
Alx1Q8C8B0 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Alx1Q8C8B0 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Alx1Q8C8B0 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Alx1Q8C8B0 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Alx1Q8C8B0 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Alx1Q8C8B0 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Alx1Q8C8B0 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Alx1Q8C8B0 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Alx1Q8C8B0 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Alx1Q8C8B0 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Alx1Q8C8B0 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Alx1Q8C8B0 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Alx1Q8C8B0 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Alx1Q8C8B0 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Alx1Q8C8B0 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Alx1Q8C8B0 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Alx1Q8C8B0 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Alx1Q8C8B0 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Alx1Q8C8B0 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Alx1Q8C8B0 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Alx1Q8C8B0 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Alx1Q8C8B0 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Alx1Q8C8B0 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC18.1■□□□□ 0.49
Alx1Q8C8B0 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC18.1■□□□□ 0.49
Alx1Q8C8B0 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC18.1■□□□□ 0.49
Alx1Q8C8B0 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Alx1Q8C8B0 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Alx1Q8C8B0 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Alx1Q8C8B0 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC18.1■□□□□ 0.49
Alx1Q8C8B0 Gm43514-201ENSMUST00000198852 424 ntBASIC18.1■□□□□ 0.49
Alx1Q8C8B0 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Alx1Q8C8B0 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Alx1Q8C8B0 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Alx1Q8C8B0 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Alx1Q8C8B0 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Alx1Q8C8B0 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Alx1Q8C8B0 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Alx1Q8C8B0 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Alx1Q8C8B0 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
Alx1Q8C8B0 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC18.09■□□□□ 0.49
Alx1Q8C8B0 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC18.09■□□□□ 0.49
Alx1Q8C8B0 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Alx1Q8C8B0 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Alx1Q8C8B0 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Alx1Q8C8B0 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Alx1Q8C8B0 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.09■□□□□ 0.49
Alx1Q8C8B0 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Alx1Q8C8B0 Gm10499-201ENSMUST00000174094 934 ntBASIC18.09■□□□□ 0.49
Alx1Q8C8B0 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Alx1Q8C8B0 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Alx1Q8C8B0 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Alx1Q8C8B0 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Alx1Q8C8B0 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Alx1Q8C8B0 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Alx1Q8C8B0 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Alx1Q8C8B0 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Alx1Q8C8B0 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Alx1Q8C8B0 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Alx1Q8C8B0 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Alx1Q8C8B0 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Alx1Q8C8B0 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC18.08■□□□□ 0.49
Alx1Q8C8B0 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Alx1Q8C8B0 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.08■□□□□ 0.49
Alx1Q8C8B0 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Alx1Q8C8B0 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Alx1Q8C8B0 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC18.08■□□□□ 0.48
Alx1Q8C8B0 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
Alx1Q8C8B0 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Alx1Q8C8B0 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC18.08■□□□□ 0.48
Alx1Q8C8B0 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms