Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Ccdc60Q8C4J0 AC133598.3-202ENSMUST00000224219 531 ntBASIC19.83■□□□□ 0.77
Ccdc60Q8C4J0 AC159093.1-201ENSMUST00000227779 380 ntBASIC19.83■□□□□ 0.77
Ccdc60Q8C4J0 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Ccdc60Q8C4J0 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc60Q8C4J0 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC19.83■□□□□ 0.76
Ccdc60Q8C4J0 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc60Q8C4J0 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc60Q8C4J0 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc60Q8C4J0 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc60Q8C4J0 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc60Q8C4J0 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
Ccdc60Q8C4J0 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc60Q8C4J0 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc60Q8C4J0 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc60Q8C4J0 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc60Q8C4J0 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc60Q8C4J0 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC19.82■□□□□ 0.76
Ccdc60Q8C4J0 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc60Q8C4J0 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC19.82■□□□□ 0.76
Ccdc60Q8C4J0 Mzt1-203ENSMUST00000227948 952 ntBASIC19.82■□□□□ 0.76
Ccdc60Q8C4J0 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc60Q8C4J0 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc60Q8C4J0 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc60Q8C4J0 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc60Q8C4J0 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Ccdc60Q8C4J0 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc60Q8C4J0 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc60Q8C4J0 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc60Q8C4J0 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc60Q8C4J0 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc60Q8C4J0 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Ccdc60Q8C4J0 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc60Q8C4J0 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Ccdc60Q8C4J0 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Ccdc60Q8C4J0 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC19.81■□□□□ 0.76
Ccdc60Q8C4J0 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc60Q8C4J0 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc60Q8C4J0 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc60Q8C4J0 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
Ccdc60Q8C4J0 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc60Q8C4J0 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc60Q8C4J0 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC19.81■□□□□ 0.76
Ccdc60Q8C4J0 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC19.81■□□□□ 0.76
Ccdc60Q8C4J0 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc60Q8C4J0 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc60Q8C4J0 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc60Q8C4J0 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC19.81■□□□□ 0.76
Ccdc60Q8C4J0 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc60Q8C4J0 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc60Q8C4J0 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Ccdc60Q8C4J0 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc60Q8C4J0 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc60Q8C4J0 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc60Q8C4J0 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Ccdc60Q8C4J0 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc60Q8C4J0 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc60Q8C4J0 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC19.8■□□□□ 0.76
Ccdc60Q8C4J0 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc60Q8C4J0 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc60Q8C4J0 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc60Q8C4J0 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc60Q8C4J0 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc60Q8C4J0 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc60Q8C4J0 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc60Q8C4J0 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC19.8■□□□□ 0.76
Ccdc60Q8C4J0 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc60Q8C4J0 Gm5682-201ENSMUST00000173402 505 ntBASIC19.8■□□□□ 0.76
Ccdc60Q8C4J0 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc60Q8C4J0 Gm7286-201ENSMUST00000182691 1007 ntBASIC19.8■□□□□ 0.76
Ccdc60Q8C4J0 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc60Q8C4J0 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc60Q8C4J0 AC160980.1-201ENSMUST00000224136 970 ntBASIC19.8■□□□□ 0.76
Ccdc60Q8C4J0 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
Ccdc60Q8C4J0 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc60Q8C4J0 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc60Q8C4J0 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc60Q8C4J0 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc60Q8C4J0 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc60Q8C4J0 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Ccdc60Q8C4J0 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc60Q8C4J0 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc60Q8C4J0 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc60Q8C4J0 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc60Q8C4J0 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc60Q8C4J0 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc60Q8C4J0 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc60Q8C4J0 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc60Q8C4J0 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc60Q8C4J0 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc60Q8C4J0 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ccdc60Q8C4J0 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Ccdc60Q8C4J0 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc60Q8C4J0 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc60Q8C4J0 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC19.79■□□□□ 0.76
Ccdc60Q8C4J0 Gm2308-201ENSMUST00000166539 1004 ntBASIC19.79■□□□□ 0.76
Ccdc60Q8C4J0 Gm6550-201ENSMUST00000187574 993 ntBASIC19.79■□□□□ 0.76
Ccdc60Q8C4J0 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC19.79■□□□□ 0.76
Ccdc60Q8C4J0 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc60Q8C4J0 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms