Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cps1Q8C196 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cps1Q8C196 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Cps1Q8C196 Gm9719-201ENSMUST00000162765 543 ntBASIC20.71■□□□□ 0.91
Cps1Q8C196 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC20.71■□□□□ 0.91
Cps1Q8C196 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cps1Q8C196 Gm42466-201ENSMUST00000202099 1301 ntBASIC20.71■□□□□ 0.91
Cps1Q8C196 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC20.71■□□□□ 0.91
Cps1Q8C196 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cps1Q8C196 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cps1Q8C196 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
Cps1Q8C196 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cps1Q8C196 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Cps1Q8C196 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cps1Q8C196 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cps1Q8C196 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cps1Q8C196 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cps1Q8C196 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Cps1Q8C196 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
Cps1Q8C196 Gm6539-201ENSMUST00000119157 1064 ntBASIC20.7■□□□□ 0.9
Cps1Q8C196 Gm15321-201ENSMUST00000121290 288 ntBASIC20.7■□□□□ 0.9
Cps1Q8C196 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC20.7■□□□□ 0.9
Cps1Q8C196 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Cps1Q8C196 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC20.7■□□□□ 0.9
Cps1Q8C196 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC20.7■□□□□ 0.9
Cps1Q8C196 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cps1Q8C196 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC20.7■□□□□ 0.9
Cps1Q8C196 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC20.7■□□□□ 0.9
Cps1Q8C196 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC20.7■□□□□ 0.9
Cps1Q8C196 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cps1Q8C196 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cps1Q8C196 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cps1Q8C196 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cps1Q8C196 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cps1Q8C196 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cps1Q8C196 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cps1Q8C196 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cps1Q8C196 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Cps1Q8C196 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cps1Q8C196 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC20.69■□□□□ 0.9
Cps1Q8C196 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Cps1Q8C196 Syt7-204ENSMUST00000223586 1344 ntBASIC20.69■□□□□ 0.9
Cps1Q8C196 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Cps1Q8C196 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Cps1Q8C196 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cps1Q8C196 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
Cps1Q8C196 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cps1Q8C196 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cps1Q8C196 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cps1Q8C196 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cps1Q8C196 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Cps1Q8C196 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cps1Q8C196 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cps1Q8C196 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Cps1Q8C196 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC20.68■□□□□ 0.9
Cps1Q8C196 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Cps1Q8C196 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cps1Q8C196 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cps1Q8C196 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cps1Q8C196 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cps1Q8C196 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC20.68■□□□□ 0.9
Cps1Q8C196 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cps1Q8C196 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cps1Q8C196 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cps1Q8C196 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cps1Q8C196 Ntrk2-205ENSMUST00000224402 2284 ntBASIC20.68■□□□□ 0.9
Cps1Q8C196 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cps1Q8C196 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
Cps1Q8C196 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC20.68■□□□□ 0.9
Cps1Q8C196 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC20.68■□□□□ 0.9
Cps1Q8C196 Gm15593-201ENSMUST00000122085 1008 ntBASIC20.68■□□□□ 0.9
Cps1Q8C196 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Cps1Q8C196 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC20.68■□□□□ 0.9
Cps1Q8C196 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC20.68■□□□□ 0.9
Cps1Q8C196 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC20.68■□□□□ 0.9
Cps1Q8C196 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cps1Q8C196 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cps1Q8C196 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cps1Q8C196 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cps1Q8C196 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC20.67■□□□□ 0.9
Cps1Q8C196 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cps1Q8C196 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cps1Q8C196 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC20.67■□□□□ 0.9
Cps1Q8C196 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cps1Q8C196 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cps1Q8C196 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Cps1Q8C196 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cps1Q8C196 AC124732.1-201ENSMUST00000221551 910 ntBASIC20.67■□□□□ 0.9
Cps1Q8C196 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cps1Q8C196 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cps1Q8C196 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cps1Q8C196 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC20.67■□□□□ 0.9
Cps1Q8C196 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cps1Q8C196 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cps1Q8C196 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC20.66■□□□□ 0.9
Cps1Q8C196 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cps1Q8C196 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cps1Q8C196 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cps1Q8C196 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cps1Q8C196 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms