Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm9103-201ENSMUST00000119371 405 ntBASIC16.06■□□□□ 0.16
Trub1Q8C0D0 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trub1Q8C0D0 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trub1Q8C0D0 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.06■□□□□ 0.16
Trub1Q8C0D0 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
Trub1Q8C0D0 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.06■□□□□ 0.16
Trub1Q8C0D0 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.06■□□□□ 0.16
Trub1Q8C0D0 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
Trub1Q8C0D0 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trub1Q8C0D0 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.06■□□□□ 0.16
Trub1Q8C0D0 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trub1Q8C0D0 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trub1Q8C0D0 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Trub1Q8C0D0 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trub1Q8C0D0 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trub1Q8C0D0 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trub1Q8C0D0 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trub1Q8C0D0 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trub1Q8C0D0 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trub1Q8C0D0 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trub1Q8C0D0 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Trub1Q8C0D0 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trub1Q8C0D0 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.05■□□□□ 0.16
Trub1Q8C0D0 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trub1Q8C0D0 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.05■□□□□ 0.16
Trub1Q8C0D0 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trub1Q8C0D0 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trub1Q8C0D0 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Trub1Q8C0D0 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trub1Q8C0D0 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trub1Q8C0D0 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trub1Q8C0D0 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trub1Q8C0D0 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trub1Q8C0D0 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trub1Q8C0D0 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trub1Q8C0D0 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trub1Q8C0D0 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trub1Q8C0D0 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.05■□□□□ 0.16
Trub1Q8C0D0 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trub1Q8C0D0 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trub1Q8C0D0 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trub1Q8C0D0 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trub1Q8C0D0 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trub1Q8C0D0 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.04■□□□□ 0.16
Trub1Q8C0D0 Gm14722-201ENSMUST00000118943 689 ntBASIC16.04■□□□□ 0.16
Trub1Q8C0D0 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.04■□□□□ 0.16
Trub1Q8C0D0 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.04■□□□□ 0.16
Trub1Q8C0D0 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.04■□□□□ 0.16
Trub1Q8C0D0 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.04■□□□□ 0.16
Trub1Q8C0D0 Grk6-207ENSMUST00000225925 2769 ntBASIC16.04■□□□□ 0.16
Trub1Q8C0D0 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trub1Q8C0D0 BC037039-201ENSMUST00000192003 2205 ntBASIC16.04■□□□□ 0.16
Trub1Q8C0D0 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trub1Q8C0D0 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trub1Q8C0D0 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trub1Q8C0D0 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trub1Q8C0D0 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trub1Q8C0D0 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trub1Q8C0D0 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trub1Q8C0D0 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trub1Q8C0D0 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trub1Q8C0D0 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trub1Q8C0D0 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trub1Q8C0D0 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trub1Q8C0D0 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
Trub1Q8C0D0 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trub1Q8C0D0 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trub1Q8C0D0 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trub1Q8C0D0 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Trub1Q8C0D0 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trub1Q8C0D0 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trub1Q8C0D0 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trub1Q8C0D0 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trub1Q8C0D0 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trub1Q8C0D0 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Trub1Q8C0D0 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Trub1Q8C0D0 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trub1Q8C0D0 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trub1Q8C0D0 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.03■□□□□ 0.16
Trub1Q8C0D0 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.03■□□□□ 0.16
Trub1Q8C0D0 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trub1Q8C0D0 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trub1Q8C0D0 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trub1Q8C0D0 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trub1Q8C0D0 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.03■□□□□ 0.16
Trub1Q8C0D0 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trub1Q8C0D0 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trub1Q8C0D0 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trub1Q8C0D0 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Trub1Q8C0D0 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.03■□□□□ 0.16
Trub1Q8C0D0 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trub1Q8C0D0 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trub1Q8C0D0 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trub1Q8C0D0 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Trub1Q8C0D0 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trub1Q8C0D0 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trub1Q8C0D0 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trub1Q8C0D0 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Trub1Q8C0D0 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Trub1Q8C0D0 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms