Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Sh3rf2Q8BZT2 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3rf2Q8BZT2 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3rf2Q8BZT2 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Sh3rf2Q8BZT2 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3rf2Q8BZT2 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3rf2Q8BZT2 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3rf2Q8BZT2 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Sh3rf2Q8BZT2 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.75■□□□□ 0.11
Sh3rf2Q8BZT2 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.75■□□□□ 0.11
Sh3rf2Q8BZT2 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Sh3rf2Q8BZT2 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.75■□□□□ 0.11
Sh3rf2Q8BZT2 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3rf2Q8BZT2 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3rf2Q8BZT2 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.75■□□□□ 0.11
Sh3rf2Q8BZT2 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.75■□□□□ 0.11
Sh3rf2Q8BZT2 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3rf2Q8BZT2 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.75■□□□□ 0.11
Sh3rf2Q8BZT2 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3rf2Q8BZT2 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3rf2Q8BZT2 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3rf2Q8BZT2 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.74■□□□□ 0.11
Sh3rf2Q8BZT2 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3rf2Q8BZT2 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3rf2Q8BZT2 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3rf2Q8BZT2 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3rf2Q8BZT2 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.74■□□□□ 0.11
Sh3rf2Q8BZT2 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3rf2Q8BZT2 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3rf2Q8BZT2 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3rf2Q8BZT2 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3rf2Q8BZT2 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.74■□□□□ 0.11
Sh3rf2Q8BZT2 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3rf2Q8BZT2 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3rf2Q8BZT2 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3rf2Q8BZT2 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.74■□□□□ 0.11
Sh3rf2Q8BZT2 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3rf2Q8BZT2 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3rf2Q8BZT2 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.74■□□□□ 0.11
Sh3rf2Q8BZT2 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3rf2Q8BZT2 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3rf2Q8BZT2 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3rf2Q8BZT2 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3rf2Q8BZT2 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3rf2Q8BZT2 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3rf2Q8BZT2 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3rf2Q8BZT2 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3rf2Q8BZT2 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3rf2Q8BZT2 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.73■□□□□ 0.11
Sh3rf2Q8BZT2 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3rf2Q8BZT2 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3rf2Q8BZT2 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3rf2Q8BZT2 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3rf2Q8BZT2 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.73■□□□□ 0.11
Sh3rf2Q8BZT2 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.73■□□□□ 0.11
Sh3rf2Q8BZT2 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3rf2Q8BZT2 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.73■□□□□ 0.11
Sh3rf2Q8BZT2 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3rf2Q8BZT2 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3rf2Q8BZT2 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.73■□□□□ 0.11
Sh3rf2Q8BZT2 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.73■□□□□ 0.11
Sh3rf2Q8BZT2 Gm44492-201ENSMUST00000197012 141 ntBASIC15.73■□□□□ 0.11
Sh3rf2Q8BZT2 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Sh3rf2Q8BZT2 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Sh3rf2Q8BZT2 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.73■□□□□ 0.11
Sh3rf2Q8BZT2 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3rf2Q8BZT2 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.73■□□□□ 0.11
Sh3rf2Q8BZT2 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Sh3rf2Q8BZT2 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3rf2Q8BZT2 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3rf2Q8BZT2 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3rf2Q8BZT2 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3rf2Q8BZT2 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.73■□□□□ 0.11
Sh3rf2Q8BZT2 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3rf2Q8BZT2 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3rf2Q8BZT2 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Sh3rf2Q8BZT2 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Sh3rf2Q8BZT2 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.73■□□□□ 0.11
Sh3rf2Q8BZT2 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3rf2Q8BZT2 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3rf2Q8BZT2 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3rf2Q8BZT2 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3rf2Q8BZT2 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3rf2Q8BZT2 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3rf2Q8BZT2 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3rf2Q8BZT2 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Sh3rf2Q8BZT2 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.72■□□□□ 0.11
Sh3rf2Q8BZT2 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.72■□□□□ 0.11
Sh3rf2Q8BZT2 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3rf2Q8BZT2 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.72■□□□□ 0.11
Sh3rf2Q8BZT2 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3rf2Q8BZT2 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3rf2Q8BZT2 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.72■□□□□ 0.11
Sh3rf2Q8BZT2 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Sh3rf2Q8BZT2 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Sh3rf2Q8BZT2 Gm17968-201ENSMUST00000194902 784 ntBASIC15.72■□□□□ 0.11
Sh3rf2Q8BZT2 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.72■□□□□ 0.11
Sh3rf2Q8BZT2 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.72■□□□□ 0.11
Sh3rf2Q8BZT2 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3rf2Q8BZT2 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms