Protein–RNA interactions for Protein: Q8BW72

Kdm4a, Lysine-specific demethylase 4A, mousemouse

Predictions only

Length 1,064 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm4aQ8BW72 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Kdm4aQ8BW72 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Kdm4aQ8BW72 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Kdm4aQ8BW72 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Kdm4aQ8BW72 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Kdm4aQ8BW72 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Kdm4aQ8BW72 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Kdm4aQ8BW72 Ank2-226ENSMUST00000189368 339 ntBASIC18.33■□□□□ 0.52
Kdm4aQ8BW72 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Kdm4aQ8BW72 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Kdm4aQ8BW72 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Kdm4aQ8BW72 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Kdm4aQ8BW72 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
Kdm4aQ8BW72 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Kdm4aQ8BW72 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Kdm4aQ8BW72 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Kdm4aQ8BW72 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Kdm4aQ8BW72 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC18.32■□□□□ 0.52
Kdm4aQ8BW72 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Kdm4aQ8BW72 Gm43352-201ENSMUST00000196419 3065 ntBASIC18.32■□□□□ 0.52
Kdm4aQ8BW72 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Kdm4aQ8BW72 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Kdm4aQ8BW72 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Kdm4aQ8BW72 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Kdm4aQ8BW72 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.32■□□□□ 0.52
Kdm4aQ8BW72 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.32■□□□□ 0.52
Kdm4aQ8BW72 Mir6404-201ENSMUST00000183699 94 ntBASIC18.32■□□□□ 0.52
Kdm4aQ8BW72 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Kdm4aQ8BW72 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Kdm4aQ8BW72 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Kdm4aQ8BW72 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Kdm4aQ8BW72 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Kdm4aQ8BW72 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Kdm4aQ8BW72 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Kdm4aQ8BW72 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC18.32■□□□□ 0.52
Kdm4aQ8BW72 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Kdm4aQ8BW72 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Kdm4aQ8BW72 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Kdm4aQ8BW72 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Kdm4aQ8BW72 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Kdm4aQ8BW72 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Kdm4aQ8BW72 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Kdm4aQ8BW72 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Kdm4aQ8BW72 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Kdm4aQ8BW72 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Kdm4aQ8BW72 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Kdm4aQ8BW72 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Kdm4aQ8BW72 Gm17807-201ENSMUST00000186869 298 ntBASIC18.31■□□□□ 0.52
Kdm4aQ8BW72 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.31■□□□□ 0.52
Kdm4aQ8BW72 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Kdm4aQ8BW72 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Kdm4aQ8BW72 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Kdm4aQ8BW72 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC18.31■□□□□ 0.52
Kdm4aQ8BW72 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Kdm4aQ8BW72 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Kdm4aQ8BW72 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Kdm4aQ8BW72 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Kdm4aQ8BW72 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Kdm4aQ8BW72 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Kdm4aQ8BW72 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm4aQ8BW72 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Kdm4aQ8BW72 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm4aQ8BW72 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm4aQ8BW72 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Kdm4aQ8BW72 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Kdm4aQ8BW72 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm4aQ8BW72 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Kdm4aQ8BW72 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Kdm4aQ8BW72 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm4aQ8BW72 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Kdm4aQ8BW72 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm4aQ8BW72 Rprl3-201ENSMUST00000157400 290 ntBASIC18.3■□□□□ 0.52
Kdm4aQ8BW72 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm4aQ8BW72 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm4aQ8BW72 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.3■□□□□ 0.52
Kdm4aQ8BW72 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm4aQ8BW72 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm4aQ8BW72 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Kdm4aQ8BW72 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm4aQ8BW72 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm4aQ8BW72 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm4aQ8BW72 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC18.3■□□□□ 0.52
Kdm4aQ8BW72 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm4aQ8BW72 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm4aQ8BW72 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.29■□□□□ 0.52
Kdm4aQ8BW72 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.29■□□□□ 0.52
Kdm4aQ8BW72 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Kdm4aQ8BW72 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC18.29■□□□□ 0.52
Kdm4aQ8BW72 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Kdm4aQ8BW72 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Kdm4aQ8BW72 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Kdm4aQ8BW72 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Kdm4aQ8BW72 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.29■□□□□ 0.52
Kdm4aQ8BW72 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18.29■□□□□ 0.52
Kdm4aQ8BW72 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.29■□□□□ 0.52
Kdm4aQ8BW72 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Kdm4aQ8BW72 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Kdm4aQ8BW72 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Kdm4aQ8BW72 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Kdm4aQ8BW72 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms