Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Fam43aQ8BUP8 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Fam43aQ8BUP8 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Fam43aQ8BUP8 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Fam43aQ8BUP8 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Fam43aQ8BUP8 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.42■□□□□ 0.38
Fam43aQ8BUP8 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Fam43aQ8BUP8 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.41■□□□□ 0.38
Fam43aQ8BUP8 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Fam43aQ8BUP8 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Fam43aQ8BUP8 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.41■□□□□ 0.38
Fam43aQ8BUP8 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Fam43aQ8BUP8 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Fam43aQ8BUP8 Gm18115-201ENSMUST00000221209 621 ntBASIC17.41■□□□□ 0.38
Fam43aQ8BUP8 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Fam43aQ8BUP8 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Fam43aQ8BUP8 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.41■□□□□ 0.38
Fam43aQ8BUP8 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.41■□□□□ 0.38
Fam43aQ8BUP8 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Fam43aQ8BUP8 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Fam43aQ8BUP8 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.41■□□□□ 0.38
Fam43aQ8BUP8 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Fam43aQ8BUP8 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Fam43aQ8BUP8 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Fam43aQ8BUP8 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fam43aQ8BUP8 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fam43aQ8BUP8 Sorbs3-204ENSMUST00000227929 2460 ntBASIC17.4■□□□□ 0.38
Fam43aQ8BUP8 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fam43aQ8BUP8 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Fam43aQ8BUP8 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Fam43aQ8BUP8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fam43aQ8BUP8 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fam43aQ8BUP8 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fam43aQ8BUP8 Gm11355-201ENSMUST00000121120 306 ntBASIC17.4■□□□□ 0.38
Fam43aQ8BUP8 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Fam43aQ8BUP8 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fam43aQ8BUP8 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fam43aQ8BUP8 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.4■□□□□ 0.38
Fam43aQ8BUP8 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fam43aQ8BUP8 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.4■□□□□ 0.38
Fam43aQ8BUP8 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fam43aQ8BUP8 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fam43aQ8BUP8 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Fam43aQ8BUP8 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fam43aQ8BUP8 AC153366.2-201ENSMUST00000219461 1984 ntBASIC17.4■□□□□ 0.38
Fam43aQ8BUP8 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fam43aQ8BUP8 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Fam43aQ8BUP8 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.4■□□□□ 0.38
Fam43aQ8BUP8 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fam43aQ8BUP8 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fam43aQ8BUP8 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Fam43aQ8BUP8 Gm37691-201ENSMUST00000192147 2573 ntBASIC17.39■□□□□ 0.38
Fam43aQ8BUP8 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Fam43aQ8BUP8 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Fam43aQ8BUP8 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Fam43aQ8BUP8 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Fam43aQ8BUP8 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Fam43aQ8BUP8 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Fam43aQ8BUP8 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Fam43aQ8BUP8 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Fam43aQ8BUP8 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Fam43aQ8BUP8 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.39■□□□□ 0.37
Fam43aQ8BUP8 Gm18421-201ENSMUST00000204122 625 ntBASIC17.39■□□□□ 0.37
Fam43aQ8BUP8 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Fam43aQ8BUP8 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Fam43aQ8BUP8 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Fam43aQ8BUP8 Ntrk2-209ENSMUST00000225950 2640 ntBASIC17.39■□□□□ 0.37
Fam43aQ8BUP8 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Fam43aQ8BUP8 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Fam43aQ8BUP8 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Fam43aQ8BUP8 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.38■□□□□ 0.37
Fam43aQ8BUP8 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Fam43aQ8BUP8 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Fam43aQ8BUP8 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Fam43aQ8BUP8 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Fam43aQ8BUP8 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Fam43aQ8BUP8 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Fam43aQ8BUP8 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Fam43aQ8BUP8 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Fam43aQ8BUP8 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Fam43aQ8BUP8 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Fam43aQ8BUP8 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.38■□□□□ 0.37
Fam43aQ8BUP8 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Fam43aQ8BUP8 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.38■□□□□ 0.37
Fam43aQ8BUP8 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Fam43aQ8BUP8 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.38■□□□□ 0.37
Fam43aQ8BUP8 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Fam43aQ8BUP8 Gm6345-202ENSMUST00000180900 204 ntBASIC17.38■□□□□ 0.37
Fam43aQ8BUP8 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.38■□□□□ 0.37
Fam43aQ8BUP8 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.38■□□□□ 0.37
Fam43aQ8BUP8 Gm7977-201ENSMUST00000193787 748 ntBASIC17.38■□□□□ 0.37
Fam43aQ8BUP8 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.38■□□□□ 0.37
Fam43aQ8BUP8 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Fam43aQ8BUP8 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Fam43aQ8BUP8 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Fam43aQ8BUP8 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Fam43aQ8BUP8 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Fam43aQ8BUP8 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.38■□□□□ 0.37
Fam43aQ8BUP8 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Fam43aQ8BUP8 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms