Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smco3Q8BQM7 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC12.86□□□□□ -0.35
Smco3Q8BQM7 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.86□□□□□ -0.35
Smco3Q8BQM7 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Smco3Q8BQM7 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smco3Q8BQM7 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Smco3Q8BQM7 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Smco3Q8BQM7 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smco3Q8BQM7 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Smco3Q8BQM7 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Smco3Q8BQM7 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smco3Q8BQM7 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smco3Q8BQM7 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Smco3Q8BQM7 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smco3Q8BQM7 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smco3Q8BQM7 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smco3Q8BQM7 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.86□□□□□ -0.35
Smco3Q8BQM7 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smco3Q8BQM7 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smco3Q8BQM7 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smco3Q8BQM7 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smco3Q8BQM7 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Smco3Q8BQM7 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smco3Q8BQM7 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smco3Q8BQM7 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Smco3Q8BQM7 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smco3Q8BQM7 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Smco3Q8BQM7 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smco3Q8BQM7 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.85□□□□□ -0.35
Smco3Q8BQM7 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smco3Q8BQM7 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Smco3Q8BQM7 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smco3Q8BQM7 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smco3Q8BQM7 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smco3Q8BQM7 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Smco3Q8BQM7 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smco3Q8BQM7 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smco3Q8BQM7 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smco3Q8BQM7 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smco3Q8BQM7 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smco3Q8BQM7 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Smco3Q8BQM7 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.85□□□□□ -0.35
Smco3Q8BQM7 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC12.85□□□□□ -0.35
Smco3Q8BQM7 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smco3Q8BQM7 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smco3Q8BQM7 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Smco3Q8BQM7 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Smco3Q8BQM7 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smco3Q8BQM7 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Smco3Q8BQM7 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.85□□□□□ -0.35
Smco3Q8BQM7 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Smco3Q8BQM7 Zfp264-201ENSMUST00000208656 1563 ntBASIC12.85□□□□□ -0.35
Smco3Q8BQM7 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Smco3Q8BQM7 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smco3Q8BQM7 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Smco3Q8BQM7 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smco3Q8BQM7 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Smco3Q8BQM7 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smco3Q8BQM7 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smco3Q8BQM7 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Smco3Q8BQM7 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smco3Q8BQM7 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smco3Q8BQM7 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smco3Q8BQM7 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smco3Q8BQM7 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smco3Q8BQM7 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Smco3Q8BQM7 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.84□□□□□ -0.35
Smco3Q8BQM7 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Smco3Q8BQM7 Gm13186-201ENSMUST00000118031 316 ntBASIC12.84□□□□□ -0.35
Smco3Q8BQM7 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Smco3Q8BQM7 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smco3Q8BQM7 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smco3Q8BQM7 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smco3Q8BQM7 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Smco3Q8BQM7 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smco3Q8BQM7 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.84□□□□□ -0.35
Smco3Q8BQM7 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Smco3Q8BQM7 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.84□□□□□ -0.35
Smco3Q8BQM7 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Smco3Q8BQM7 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smco3Q8BQM7 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smco3Q8BQM7 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smco3Q8BQM7 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smco3Q8BQM7 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smco3Q8BQM7 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Smco3Q8BQM7 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Smco3Q8BQM7 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smco3Q8BQM7 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Smco3Q8BQM7 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Smco3Q8BQM7 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Smco3Q8BQM7 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smco3Q8BQM7 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smco3Q8BQM7 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smco3Q8BQM7 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Smco3Q8BQM7 Gm37856-201ENSMUST00000191634 999 ntBASIC12.83□□□□□ -0.36
Smco3Q8BQM7 Gm44878-201ENSMUST00000205812 1295 ntBASIC12.83□□□□□ -0.36
Smco3Q8BQM7 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Smco3Q8BQM7 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smco3Q8BQM7 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Smco3Q8BQM7 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms