Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.28■□□□□ 0.2
Ccdc40Q8BI79 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc40Q8BI79 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc40Q8BI79 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc40Q8BI79 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc40Q8BI79 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc40Q8BI79 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc40Q8BI79 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc40Q8BI79 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc40Q8BI79 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc40Q8BI79 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc40Q8BI79 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc40Q8BI79 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc40Q8BI79 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc40Q8BI79 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Ccdc40Q8BI79 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc40Q8BI79 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc40Q8BI79 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.27■□□□□ 0.2
Ccdc40Q8BI79 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.27■□□□□ 0.2
Ccdc40Q8BI79 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.27■□□□□ 0.2
Ccdc40Q8BI79 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
Ccdc40Q8BI79 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.27■□□□□ 0.2
Ccdc40Q8BI79 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Ccdc40Q8BI79 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Ccdc40Q8BI79 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc40Q8BI79 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.27■□□□□ 0.19
Ccdc40Q8BI79 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc40Q8BI79 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc40Q8BI79 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc40Q8BI79 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.19
Ccdc40Q8BI79 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Ccdc40Q8BI79 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc40Q8BI79 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc40Q8BI79 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Ccdc40Q8BI79 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc40Q8BI79 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc40Q8BI79 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc40Q8BI79 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc40Q8BI79 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc40Q8BI79 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc40Q8BI79 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc40Q8BI79 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc40Q8BI79 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc40Q8BI79 Gm27742-201ENSMUST00000184667 60 ntBASIC16.26■□□□□ 0.19
Ccdc40Q8BI79 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Ccdc40Q8BI79 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc40Q8BI79 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc40Q8BI79 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc40Q8BI79 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.26■□□□□ 0.19
Ccdc40Q8BI79 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc40Q8BI79 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc40Q8BI79 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Ccdc40Q8BI79 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc40Q8BI79 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc40Q8BI79 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc40Q8BI79 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc40Q8BI79 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc40Q8BI79 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc40Q8BI79 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc40Q8BI79 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc40Q8BI79 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc40Q8BI79 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.25■□□□□ 0.19
Ccdc40Q8BI79 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc40Q8BI79 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc40Q8BI79 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc40Q8BI79 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc40Q8BI79 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
Ccdc40Q8BI79 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Ccdc40Q8BI79 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc40Q8BI79 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc40Q8BI79 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc40Q8BI79 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc40Q8BI79 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc40Q8BI79 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.25■□□□□ 0.19
Ccdc40Q8BI79 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.25■□□□□ 0.19
Ccdc40Q8BI79 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Ccdc40Q8BI79 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc40Q8BI79 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc40Q8BI79 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc40Q8BI79 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.25■□□□□ 0.19
Ccdc40Q8BI79 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc40Q8BI79 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc40Q8BI79 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc40Q8BI79 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc40Q8BI79 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc40Q8BI79 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc40Q8BI79 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc40Q8BI79 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc40Q8BI79 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc40Q8BI79 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc40Q8BI79 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc40Q8BI79 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc40Q8BI79 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Ccdc40Q8BI79 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.24■□□□□ 0.19
Ccdc40Q8BI79 Rprl3-201ENSMUST00000157400 290 ntBASIC16.24■□□□□ 0.19
Ccdc40Q8BI79 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc40Q8BI79 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc40Q8BI79 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.24■□□□□ 0.19
Ccdc40Q8BI79 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc40Q8BI79 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms