Protein–RNA interactions for Protein: Q80YV2

Zc3hc1, Nuclear-interacting partner of ALK, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3hc1Q80YV2 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Zc3hc1Q80YV2 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Zc3hc1Q80YV2 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Zc3hc1Q80YV2 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Zc3hc1Q80YV2 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Zc3hc1Q80YV2 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Zc3hc1Q80YV2 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Zc3hc1Q80YV2 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Zc3hc1Q80YV2 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Zc3hc1Q80YV2 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Zc3hc1Q80YV2 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Zc3hc1Q80YV2 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Zc3hc1Q80YV2 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Zc3hc1Q80YV2 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Zc3hc1Q80YV2 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.26□□□□□ -0.13
Zc3hc1Q80YV2 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Zc3hc1Q80YV2 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Zc3hc1Q80YV2 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Zc3hc1Q80YV2 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.26□□□□□ -0.13
Zc3hc1Q80YV2 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Zc3hc1Q80YV2 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Zc3hc1Q80YV2 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Zc3hc1Q80YV2 Gm27389-201ENSMUST00000183622 195 ntBASIC14.26□□□□□ -0.13
Zc3hc1Q80YV2 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.26□□□□□ -0.13
Zc3hc1Q80YV2 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.26□□□□□ -0.13
Zc3hc1Q80YV2 Gm45058-201ENSMUST00000205810 766 ntBASIC14.26□□□□□ -0.13
Zc3hc1Q80YV2 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Zc3hc1Q80YV2 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Zc3hc1Q80YV2 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Zc3hc1Q80YV2 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Zc3hc1Q80YV2 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Zc3hc1Q80YV2 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Zc3hc1Q80YV2 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Zc3hc1Q80YV2 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Zc3hc1Q80YV2 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Zc3hc1Q80YV2 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Zc3hc1Q80YV2 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Zc3hc1Q80YV2 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Zc3hc1Q80YV2 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Zc3hc1Q80YV2 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Zc3hc1Q80YV2 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Zc3hc1Q80YV2 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Zc3hc1Q80YV2 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Zc3hc1Q80YV2 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Zc3hc1Q80YV2 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Zc3hc1Q80YV2 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.25□□□□□ -0.13
Zc3hc1Q80YV2 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Zc3hc1Q80YV2 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Zc3hc1Q80YV2 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.25□□□□□ -0.13
Zc3hc1Q80YV2 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.25□□□□□ -0.13
Zc3hc1Q80YV2 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Zc3hc1Q80YV2 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Zc3hc1Q80YV2 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.25□□□□□ -0.13
Zc3hc1Q80YV2 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Zc3hc1Q80YV2 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.25□□□□□ -0.13
Zc3hc1Q80YV2 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Zc3hc1Q80YV2 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Zc3hc1Q80YV2 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Zc3hc1Q80YV2 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Zc3hc1Q80YV2 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Zc3hc1Q80YV2 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Zc3hc1Q80YV2 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Zc3hc1Q80YV2 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Zc3hc1Q80YV2 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Zc3hc1Q80YV2 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.24□□□□□ -0.13
Zc3hc1Q80YV2 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Zc3hc1Q80YV2 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Zc3hc1Q80YV2 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Zc3hc1Q80YV2 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Zc3hc1Q80YV2 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.24□□□□□ -0.13
Zc3hc1Q80YV2 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Zc3hc1Q80YV2 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.24□□□□□ -0.13
Zc3hc1Q80YV2 Gm18959-201ENSMUST00000208954 655 ntBASIC14.24□□□□□ -0.13
Zc3hc1Q80YV2 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.24□□□□□ -0.13
Zc3hc1Q80YV2 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Zc3hc1Q80YV2 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Zc3hc1Q80YV2 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Zc3hc1Q80YV2 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Zc3hc1Q80YV2 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.24□□□□□ -0.13
Zc3hc1Q80YV2 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Zc3hc1Q80YV2 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Zc3hc1Q80YV2 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Zc3hc1Q80YV2 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Zc3hc1Q80YV2 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Zc3hc1Q80YV2 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Zc3hc1Q80YV2 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Zc3hc1Q80YV2 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.23□□□□□ -0.13
Zc3hc1Q80YV2 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Zc3hc1Q80YV2 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Zc3hc1Q80YV2 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Zc3hc1Q80YV2 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Zc3hc1Q80YV2 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Zc3hc1Q80YV2 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Zc3hc1Q80YV2 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Zc3hc1Q80YV2 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Zc3hc1Q80YV2 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Zc3hc1Q80YV2 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Zc3hc1Q80YV2 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.23□□□□□ -0.13
Zc3hc1Q80YV2 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Zc3hc1Q80YV2 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms