Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Usp6nlQ80XC3 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp6nlQ80XC3 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp6nlQ80XC3 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Usp6nlQ80XC3 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp6nlQ80XC3 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp6nlQ80XC3 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp6nlQ80XC3 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Usp6nlQ80XC3 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Usp6nlQ80XC3 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp6nlQ80XC3 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Usp6nlQ80XC3 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Usp6nlQ80XC3 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC17.13■□□□□ 0.33
Usp6nlQ80XC3 Gm43474-201ENSMUST00000196415 774 ntBASIC17.13■□□□□ 0.33
Usp6nlQ80XC3 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC17.13■□□□□ 0.33
Usp6nlQ80XC3 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp6nlQ80XC3 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.13■□□□□ 0.33
Usp6nlQ80XC3 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.13■□□□□ 0.33
Usp6nlQ80XC3 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp6nlQ80XC3 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp6nlQ80XC3 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Usp6nlQ80XC3 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp6nlQ80XC3 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp6nlQ80XC3 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp6nlQ80XC3 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp6nlQ80XC3 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp6nlQ80XC3 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp6nlQ80XC3 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp6nlQ80XC3 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp6nlQ80XC3 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp6nlQ80XC3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.12■□□□□ 0.33
Usp6nlQ80XC3 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp6nlQ80XC3 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp6nlQ80XC3 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp6nlQ80XC3 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp6nlQ80XC3 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp6nlQ80XC3 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp6nlQ80XC3 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp6nlQ80XC3 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp6nlQ80XC3 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Usp6nlQ80XC3 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp6nlQ80XC3 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC17.12■□□□□ 0.33
Usp6nlQ80XC3 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.12■□□□□ 0.33
Usp6nlQ80XC3 Gm12008-201ENSMUST00000117791 755 ntBASIC17.12■□□□□ 0.33
Usp6nlQ80XC3 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.12■□□□□ 0.33
Usp6nlQ80XC3 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.12■□□□□ 0.33
Usp6nlQ80XC3 Rprl2-201ENSMUST00000157150 290 ntBASIC17.12■□□□□ 0.33
Usp6nlQ80XC3 Gm18889-201ENSMUST00000174284 929 ntBASIC17.12■□□□□ 0.33
Usp6nlQ80XC3 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp6nlQ80XC3 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Usp6nlQ80XC3 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Usp6nlQ80XC3 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.12■□□□□ 0.33
Usp6nlQ80XC3 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Usp6nlQ80XC3 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp6nlQ80XC3 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp6nlQ80XC3 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp6nlQ80XC3 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp6nlQ80XC3 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp6nlQ80XC3 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp6nlQ80XC3 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Usp6nlQ80XC3 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.11■□□□□ 0.33
Usp6nlQ80XC3 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp6nlQ80XC3 Gm9385-201ENSMUST00000117563 472 ntBASIC17.11■□□□□ 0.33
Usp6nlQ80XC3 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.11■□□□□ 0.33
Usp6nlQ80XC3 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp6nlQ80XC3 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.11■□□□□ 0.33
Usp6nlQ80XC3 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.11■□□□□ 0.33
Usp6nlQ80XC3 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Usp6nlQ80XC3 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp6nlQ80XC3 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Usp6nlQ80XC3 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC17.11■□□□□ 0.33
Usp6nlQ80XC3 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Usp6nlQ80XC3 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp6nlQ80XC3 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp6nlQ80XC3 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Usp6nlQ80XC3 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp6nlQ80XC3 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp6nlQ80XC3 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp6nlQ80XC3 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp6nlQ80XC3 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Usp6nlQ80XC3 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp6nlQ80XC3 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp6nlQ80XC3 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Usp6nlQ80XC3 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp6nlQ80XC3 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Usp6nlQ80XC3 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp6nlQ80XC3 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Usp6nlQ80XC3 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp6nlQ80XC3 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp6nlQ80XC3 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Usp6nlQ80XC3 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC17.1■□□□□ 0.33
Usp6nlQ80XC3 Gm16198-201ENSMUST00000118766 670 ntBASIC17.1■□□□□ 0.33
Usp6nlQ80XC3 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Usp6nlQ80XC3 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC17.1■□□□□ 0.33
Usp6nlQ80XC3 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Usp6nlQ80XC3 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Usp6nlQ80XC3 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.1■□□□□ 0.33
Usp6nlQ80XC3 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.1■□□□□ 0.33
Usp6nlQ80XC3 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp6nlQ80XC3 AC140397.2-201ENSMUST00000224213 834 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms