Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vrk1Q80X41 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vrk1Q80X41 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vrk1Q80X41 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Vrk1Q80X41 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vrk1Q80X41 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vrk1Q80X41 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vrk1Q80X41 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vrk1Q80X41 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.84□□□□□ -0.03
Vrk1Q80X41 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Vrk1Q80X41 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vrk1Q80X41 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vrk1Q80X41 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vrk1Q80X41 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.84□□□□□ -0.03
Vrk1Q80X41 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Vrk1Q80X41 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vrk1Q80X41 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vrk1Q80X41 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vrk1Q80X41 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vrk1Q80X41 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vrk1Q80X41 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.84□□□□□ -0.03
Vrk1Q80X41 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.84□□□□□ -0.03
Vrk1Q80X41 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Vrk1Q80X41 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vrk1Q80X41 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vrk1Q80X41 Gm18489-201ENSMUST00000172565 551 ntBASIC14.84□□□□□ -0.03
Vrk1Q80X41 Gm9682-201ENSMUST00000197505 556 ntBASIC14.84□□□□□ -0.03
Vrk1Q80X41 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Vrk1Q80X41 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.84□□□□□ -0.03
Vrk1Q80X41 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Vrk1Q80X41 Chchd1-203ENSMUST00000224633 557 ntBASIC14.84□□□□□ -0.03
Vrk1Q80X41 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vrk1Q80X41 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vrk1Q80X41 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vrk1Q80X41 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vrk1Q80X41 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.84□□□□□ -0.03
Vrk1Q80X41 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.84□□□□□ -0.03
Vrk1Q80X41 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.84□□□□□ -0.03
Vrk1Q80X41 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vrk1Q80X41 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vrk1Q80X41 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vrk1Q80X41 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Vrk1Q80X41 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Vrk1Q80X41 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Vrk1Q80X41 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Vrk1Q80X41 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Vrk1Q80X41 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Vrk1Q80X41 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vrk1Q80X41 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vrk1Q80X41 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vrk1Q80X41 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Vrk1Q80X41 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Vrk1Q80X41 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vrk1Q80X41 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vrk1Q80X41 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vrk1Q80X41 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vrk1Q80X41 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vrk1Q80X41 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.83□□□□□ -0.04
Vrk1Q80X41 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.83□□□□□ -0.04
Vrk1Q80X41 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.83□□□□□ -0.04
Vrk1Q80X41 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.83□□□□□ -0.04
Vrk1Q80X41 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vrk1Q80X41 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vrk1Q80X41 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vrk1Q80X41 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Vrk1Q80X41 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Vrk1Q80X41 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Vrk1Q80X41 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Vrk1Q80X41 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vrk1Q80X41 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vrk1Q80X41 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vrk1Q80X41 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Vrk1Q80X41 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vrk1Q80X41 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vrk1Q80X41 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vrk1Q80X41 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.83□□□□□ -0.04
Vrk1Q80X41 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vrk1Q80X41 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vrk1Q80X41 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vrk1Q80X41 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Vrk1Q80X41 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Vrk1Q80X41 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vrk1Q80X41 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vrk1Q80X41 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vrk1Q80X41 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vrk1Q80X41 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vrk1Q80X41 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vrk1Q80X41 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Vrk1Q80X41 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Vrk1Q80X41 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vrk1Q80X41 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Vrk1Q80X41 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vrk1Q80X41 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vrk1Q80X41 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Vrk1Q80X41 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
Vrk1Q80X41 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vrk1Q80X41 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
Vrk1Q80X41 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vrk1Q80X41 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.82□□□□□ -0.04
Vrk1Q80X41 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms