Protein–RNA interactions for Protein: Q80UJ7

Rab3gap1, Rab3 GTPase-activating protein catalytic subunit, mousemouse

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab3gap1Q80UJ7 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.91■□□□□ 0.62
Rab3gap1Q80UJ7 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rab3gap1Q80UJ7 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab3gap1Q80UJ7 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab3gap1Q80UJ7 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab3gap1Q80UJ7 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab3gap1Q80UJ7 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab3gap1Q80UJ7 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab3gap1Q80UJ7 H2af-ps-201ENSMUST00000119066 295 ntBASIC18.9■□□□□ 0.62
Rab3gap1Q80UJ7 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC18.9■□□□□ 0.62
Rab3gap1Q80UJ7 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC18.9■□□□□ 0.62
Rab3gap1Q80UJ7 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.9■□□□□ 0.62
Rab3gap1Q80UJ7 Gm7787-201ENSMUST00000216858 688 ntBASIC18.9■□□□□ 0.62
Rab3gap1Q80UJ7 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab3gap1Q80UJ7 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab3gap1Q80UJ7 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rab3gap1Q80UJ7 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab3gap1Q80UJ7 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rab3gap1Q80UJ7 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab3gap1Q80UJ7 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab3gap1Q80UJ7 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rab3gap1Q80UJ7 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rab3gap1Q80UJ7 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Rab3gap1Q80UJ7 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rab3gap1Q80UJ7 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.62
Rab3gap1Q80UJ7 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rab3gap1Q80UJ7 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab3gap1Q80UJ7 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab3gap1Q80UJ7 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab3gap1Q80UJ7 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab3gap1Q80UJ7 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab3gap1Q80UJ7 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC18.89■□□□□ 0.61
Rab3gap1Q80UJ7 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
Rab3gap1Q80UJ7 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC18.89■□□□□ 0.61
Rab3gap1Q80UJ7 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Rab3gap1Q80UJ7 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rab3gap1Q80UJ7 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab3gap1Q80UJ7 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab3gap1Q80UJ7 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rab3gap1Q80UJ7 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.89■□□□□ 0.61
Rab3gap1Q80UJ7 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab3gap1Q80UJ7 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rab3gap1Q80UJ7 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rab3gap1Q80UJ7 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab3gap1Q80UJ7 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC18.88■□□□□ 0.61
Rab3gap1Q80UJ7 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rab3gap1Q80UJ7 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab3gap1Q80UJ7 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab3gap1Q80UJ7 Gm6736-201ENSMUST00000166583 948 ntBASIC18.88■□□□□ 0.61
Rab3gap1Q80UJ7 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC18.88■□□□□ 0.61
Rab3gap1Q80UJ7 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab3gap1Q80UJ7 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab3gap1Q80UJ7 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab3gap1Q80UJ7 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab3gap1Q80UJ7 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab3gap1Q80UJ7 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.88■□□□□ 0.61
Rab3gap1Q80UJ7 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.88■□□□□ 0.61
Rab3gap1Q80UJ7 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab3gap1Q80UJ7 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab3gap1Q80UJ7 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab3gap1Q80UJ7 Gm23935-201ENSMUST00000102303 57 ntBASIC18.87■□□□□ 0.61
Rab3gap1Q80UJ7 Gm24270-201ENSMUST00000102326 57 ntBASIC18.87■□□□□ 0.61
Rab3gap1Q80UJ7 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab3gap1Q80UJ7 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC18.87■□□□□ 0.61
Rab3gap1Q80UJ7 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab3gap1Q80UJ7 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rab3gap1Q80UJ7 Gm24245-201ENSMUST00000157318 57 ntBASIC18.87■□□□□ 0.61
Rab3gap1Q80UJ7 Gm24513-201ENSMUST00000174964 138 ntBASIC18.87■□□□□ 0.61
Rab3gap1Q80UJ7 Gm27397-201ENSMUST00000184997 107 ntBASIC18.87■□□□□ 0.61
Rab3gap1Q80UJ7 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC18.87■□□□□ 0.61
Rab3gap1Q80UJ7 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab3gap1Q80UJ7 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab3gap1Q80UJ7 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab3gap1Q80UJ7 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rab3gap1Q80UJ7 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab3gap1Q80UJ7 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab3gap1Q80UJ7 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Rab3gap1Q80UJ7 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Rab3gap1Q80UJ7 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab3gap1Q80UJ7 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Rab3gap1Q80UJ7 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab3gap1Q80UJ7 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Rab3gap1Q80UJ7 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab3gap1Q80UJ7 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab3gap1Q80UJ7 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab3gap1Q80UJ7 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab3gap1Q80UJ7 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rab3gap1Q80UJ7 Prkcz2-201ENSMUST00000206136 1756 ntBASIC18.86■□□□□ 0.61
Rab3gap1Q80UJ7 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab3gap1Q80UJ7 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab3gap1Q80UJ7 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab3gap1Q80UJ7 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Rab3gap1Q80UJ7 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab3gap1Q80UJ7 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab3gap1Q80UJ7 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rab3gap1Q80UJ7 Mir8117-201ENSMUST00000184773 107 ntBASIC18.86■□□□□ 0.61
Rab3gap1Q80UJ7 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC18.86■□□□□ 0.61
Rab3gap1Q80UJ7 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab3gap1Q80UJ7 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rab3gap1Q80UJ7 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms