Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.26■□□□□ 0.03
Pcdh19Q80TF3 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.26■□□□□ 0.03
Pcdh19Q80TF3 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.26■□□□□ 0.03
Pcdh19Q80TF3 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh19Q80TF3 Gm5867-201ENSMUST00000063197 592 ntBASIC15.26■□□□□ 0.03
Pcdh19Q80TF3 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh19Q80TF3 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh19Q80TF3 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh19Q80TF3 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Pcdh19Q80TF3 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh19Q80TF3 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh19Q80TF3 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.26■□□□□ 0.03
Pcdh19Q80TF3 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh19Q80TF3 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh19Q80TF3 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh19Q80TF3 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Pcdh19Q80TF3 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh19Q80TF3 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh19Q80TF3 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Pcdh19Q80TF3 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh19Q80TF3 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh19Q80TF3 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh19Q80TF3 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Pcdh19Q80TF3 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh19Q80TF3 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdh19Q80TF3 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.25■□□□□ 0.03
Pcdh19Q80TF3 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdh19Q80TF3 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh19Q80TF3 Gm45167-201ENSMUST00000208007 322 ntBASIC15.25■□□□□ 0.03
Pcdh19Q80TF3 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.25■□□□□ 0.03
Pcdh19Q80TF3 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Pcdh19Q80TF3 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.25■□□□□ 0.03
Pcdh19Q80TF3 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Pcdh19Q80TF3 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh19Q80TF3 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh19Q80TF3 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh19Q80TF3 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
Pcdh19Q80TF3 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh19Q80TF3 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh19Q80TF3 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh19Q80TF3 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh19Q80TF3 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh19Q80TF3 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh19Q80TF3 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh19Q80TF3 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.25■□□□□ 0.03
Pcdh19Q80TF3 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh19Q80TF3 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh19Q80TF3 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh19Q80TF3 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh19Q80TF3 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh19Q80TF3 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Pcdh19Q80TF3 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh19Q80TF3 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdh19Q80TF3 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh19Q80TF3 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Pcdh19Q80TF3 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh19Q80TF3 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh19Q80TF3 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Pcdh19Q80TF3 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh19Q80TF3 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdh19Q80TF3 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh19Q80TF3 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh19Q80TF3 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.24■□□□□ 0.03
Pcdh19Q80TF3 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh19Q80TF3 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Pcdh19Q80TF3 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.24■□□□□ 0.03
Pcdh19Q80TF3 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Pcdh19Q80TF3 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh19Q80TF3 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh19Q80TF3 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh19Q80TF3 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh19Q80TF3 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh19Q80TF3 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh19Q80TF3 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh19Q80TF3 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh19Q80TF3 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.24■□□□□ 0.03
Pcdh19Q80TF3 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh19Q80TF3 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh19Q80TF3 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh19Q80TF3 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh19Q80TF3 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh19Q80TF3 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh19Q80TF3 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh19Q80TF3 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Pcdh19Q80TF3 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.23■□□□□ 0.03
Pcdh19Q80TF3 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh19Q80TF3 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdh19Q80TF3 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh19Q80TF3 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh19Q80TF3 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh19Q80TF3 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh19Q80TF3 Gm9682-201ENSMUST00000197505 556 ntBASIC15.23■□□□□ 0.03
Pcdh19Q80TF3 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdh19Q80TF3 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.23■□□□□ 0.03
Pcdh19Q80TF3 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh19Q80TF3 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh19Q80TF3 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Pcdh19Q80TF3 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh19Q80TF3 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Pcdh19Q80TF3 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms