Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Ddx58Q6Q899 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ddx58Q6Q899 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx58Q6Q899 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx58Q6Q899 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx58Q6Q899 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx58Q6Q899 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx58Q6Q899 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC19.21■□□□□ 0.67
Ddx58Q6Q899 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx58Q6Q899 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx58Q6Q899 AC153526.5-201ENSMUST00000218661 2147 ntBASIC19.21■□□□□ 0.67
Ddx58Q6Q899 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx58Q6Q899 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx58Q6Q899 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx58Q6Q899 Gm17271-201ENSMUST00000165535 355 ntBASIC19.21■□□□□ 0.67
Ddx58Q6Q899 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Ddx58Q6Q899 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx58Q6Q899 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx58Q6Q899 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx58Q6Q899 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx58Q6Q899 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx58Q6Q899 Gm15500-202ENSMUST00000071641 1019 ntBASIC19.21■□□□□ 0.67
Ddx58Q6Q899 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx58Q6Q899 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ddx58Q6Q899 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Ddx58Q6Q899 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx58Q6Q899 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx58Q6Q899 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx58Q6Q899 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx58Q6Q899 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Ddx58Q6Q899 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx58Q6Q899 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx58Q6Q899 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx58Q6Q899 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx58Q6Q899 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Ddx58Q6Q899 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx58Q6Q899 Gm19430-201ENSMUST00000193847 2137 ntBASIC19.2■□□□□ 0.66
Ddx58Q6Q899 Gm44492-201ENSMUST00000197012 141 ntBASIC19.2■□□□□ 0.66
Ddx58Q6Q899 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx58Q6Q899 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx58Q6Q899 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx58Q6Q899 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx58Q6Q899 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC19.2■□□□□ 0.66
Ddx58Q6Q899 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx58Q6Q899 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx58Q6Q899 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx58Q6Q899 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ddx58Q6Q899 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx58Q6Q899 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx58Q6Q899 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx58Q6Q899 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ddx58Q6Q899 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC19.19■□□□□ 0.66
Ddx58Q6Q899 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Ddx58Q6Q899 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx58Q6Q899 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx58Q6Q899 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC19.19■□□□□ 0.66
Ddx58Q6Q899 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.19■□□□□ 0.66
Ddx58Q6Q899 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx58Q6Q899 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ddx58Q6Q899 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx58Q6Q899 Gm5648-201ENSMUST00000122244 1587 ntBASIC19.19■□□□□ 0.66
Ddx58Q6Q899 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx58Q6Q899 Gm29361-201ENSMUST00000183323 2000 ntBASIC19.18■□□□□ 0.66
Ddx58Q6Q899 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx58Q6Q899 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx58Q6Q899 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx58Q6Q899 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ddx58Q6Q899 Gm5177-201ENSMUST00000183092 997 ntBASIC19.18■□□□□ 0.66
Ddx58Q6Q899 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx58Q6Q899 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx58Q6Q899 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx58Q6Q899 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC19.18■□□□□ 0.66
Ddx58Q6Q899 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx58Q6Q899 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx58Q6Q899 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx58Q6Q899 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx58Q6Q899 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx58Q6Q899 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx58Q6Q899 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx58Q6Q899 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx58Q6Q899 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC19.17■□□□□ 0.66
Ddx58Q6Q899 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx58Q6Q899 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx58Q6Q899 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Ddx58Q6Q899 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ddx58Q6Q899 Gm7901-201ENSMUST00000120430 1597 ntBASIC19.17■□□□□ 0.66
Ddx58Q6Q899 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx58Q6Q899 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Ddx58Q6Q899 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx58Q6Q899 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx58Q6Q899 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Ddx58Q6Q899 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx58Q6Q899 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Ddx58Q6Q899 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx58Q6Q899 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Ddx58Q6Q899 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx58Q6Q899 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx58Q6Q899 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx58Q6Q899 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx58Q6Q899 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms