Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rif1Q6PR54 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Rif1Q6PR54 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.08□□□□□ -0.32
Rif1Q6PR54 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Rif1Q6PR54 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rif1Q6PR54 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rif1Q6PR54 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rif1Q6PR54 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rif1Q6PR54 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rif1Q6PR54 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rif1Q6PR54 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.08□□□□□ -0.32
Rif1Q6PR54 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Rif1Q6PR54 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.08□□□□□ -0.32
Rif1Q6PR54 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.08□□□□□ -0.32
Rif1Q6PR54 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.08□□□□□ -0.32
Rif1Q6PR54 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rif1Q6PR54 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rif1Q6PR54 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Rif1Q6PR54 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Rif1Q6PR54 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rif1Q6PR54 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rif1Q6PR54 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rif1Q6PR54 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rif1Q6PR54 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rif1Q6PR54 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rif1Q6PR54 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Rif1Q6PR54 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rif1Q6PR54 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rif1Q6PR54 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rif1Q6PR54 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rif1Q6PR54 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rif1Q6PR54 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rif1Q6PR54 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rif1Q6PR54 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rif1Q6PR54 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rif1Q6PR54 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Rif1Q6PR54 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Rif1Q6PR54 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rif1Q6PR54 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rif1Q6PR54 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.07□□□□□ -0.32
Rif1Q6PR54 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.07□□□□□ -0.32
Rif1Q6PR54 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Rif1Q6PR54 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.07□□□□□ -0.32
Rif1Q6PR54 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rif1Q6PR54 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rif1Q6PR54 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rif1Q6PR54 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Rif1Q6PR54 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rif1Q6PR54 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rif1Q6PR54 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rif1Q6PR54 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Rif1Q6PR54 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rif1Q6PR54 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rif1Q6PR54 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Rif1Q6PR54 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rif1Q6PR54 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rif1Q6PR54 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rif1Q6PR54 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rif1Q6PR54 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rif1Q6PR54 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Rif1Q6PR54 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rif1Q6PR54 Gm13392-201ENSMUST00000117708 150 ntBASIC13.06□□□□□ -0.32
Rif1Q6PR54 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rif1Q6PR54 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rif1Q6PR54 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rif1Q6PR54 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rif1Q6PR54 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rif1Q6PR54 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.06□□□□□ -0.32
Rif1Q6PR54 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rif1Q6PR54 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Rif1Q6PR54 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Rif1Q6PR54 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Rif1Q6PR54 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Rif1Q6PR54 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rif1Q6PR54 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rif1Q6PR54 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rif1Q6PR54 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Rif1Q6PR54 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Rif1Q6PR54 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.05□□□□□ -0.32
Rif1Q6PR54 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.05□□□□□ -0.32
Rif1Q6PR54 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rif1Q6PR54 Gm18246-201ENSMUST00000221023 728 ntBASIC13.05□□□□□ -0.32
Rif1Q6PR54 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rif1Q6PR54 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rif1Q6PR54 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.05□□□□□ -0.32
Rif1Q6PR54 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rif1Q6PR54 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rif1Q6PR54 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rif1Q6PR54 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Rif1Q6PR54 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rif1Q6PR54 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.05□□□□□ -0.32
Rif1Q6PR54 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.05□□□□□ -0.32
Rif1Q6PR54 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rif1Q6PR54 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Rif1Q6PR54 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rif1Q6PR54 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.05□□□□□ -0.32
Rif1Q6PR54 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rif1Q6PR54 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rif1Q6PR54 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rif1Q6PR54 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms