Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Casc4Q6P2L7 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Casc4Q6P2L7 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Casc4Q6P2L7 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Casc4Q6P2L7 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Casc4Q6P2L7 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Casc4Q6P2L7 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Casc4Q6P2L7 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Casc4Q6P2L7 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.11
Casc4Q6P2L7 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Casc4Q6P2L7 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Casc4Q6P2L7 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Casc4Q6P2L7 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Casc4Q6P2L7 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Casc4Q6P2L7 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Casc4Q6P2L7 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Casc4Q6P2L7 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Casc4Q6P2L7 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Casc4Q6P2L7 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Casc4Q6P2L7 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Casc4Q6P2L7 Gm8097-201ENSMUST00000117903 829 ntBASIC15.76■□□□□ 0.11
Casc4Q6P2L7 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
Casc4Q6P2L7 Gm5864-201ENSMUST00000202263 970 ntBASIC15.76■□□□□ 0.11
Casc4Q6P2L7 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.76■□□□□ 0.11
Casc4Q6P2L7 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.76■□□□□ 0.11
Casc4Q6P2L7 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Casc4Q6P2L7 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.76■□□□□ 0.11
Casc4Q6P2L7 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Casc4Q6P2L7 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Casc4Q6P2L7 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Casc4Q6P2L7 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Casc4Q6P2L7 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Casc4Q6P2L7 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Casc4Q6P2L7 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Casc4Q6P2L7 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Casc4Q6P2L7 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Casc4Q6P2L7 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Casc4Q6P2L7 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.75■□□□□ 0.11
Casc4Q6P2L7 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Casc4Q6P2L7 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Casc4Q6P2L7 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.75■□□□□ 0.11
Casc4Q6P2L7 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Casc4Q6P2L7 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Casc4Q6P2L7 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Casc4Q6P2L7 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Casc4Q6P2L7 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Casc4Q6P2L7 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Casc4Q6P2L7 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Casc4Q6P2L7 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Casc4Q6P2L7 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Casc4Q6P2L7 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Casc4Q6P2L7 Gm44357-201ENSMUST00000195897 142 ntBASIC15.75■□□□□ 0.11
Casc4Q6P2L7 Gm19658-201ENSMUST00000196231 138 ntBASIC15.75■□□□□ 0.11
Casc4Q6P2L7 Gm44367-201ENSMUST00000196836 138 ntBASIC15.75■□□□□ 0.11
Casc4Q6P2L7 Gm44350-201ENSMUST00000197197 138 ntBASIC15.75■□□□□ 0.11
Casc4Q6P2L7 Gm44390-201ENSMUST00000197533 144 ntBASIC15.75■□□□□ 0.11
Casc4Q6P2L7 Gm44313-201ENSMUST00000198018 138 ntBASIC15.75■□□□□ 0.11
Casc4Q6P2L7 Gm44486-201ENSMUST00000198508 138 ntBASIC15.75■□□□□ 0.11
Casc4Q6P2L7 Gm44314-201ENSMUST00000199263 138 ntBASIC15.75■□□□□ 0.11
Casc4Q6P2L7 Gm44394-201ENSMUST00000199558 138 ntBASIC15.75■□□□□ 0.11
Casc4Q6P2L7 Gm44484-201ENSMUST00000199873 138 ntBASIC15.75■□□□□ 0.11
Casc4Q6P2L7 Gm44466-201ENSMUST00000200264 138 ntBASIC15.75■□□□□ 0.11
Casc4Q6P2L7 Gm44359-201ENSMUST00000200671 138 ntBASIC15.75■□□□□ 0.11
Casc4Q6P2L7 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.75■□□□□ 0.11
Casc4Q6P2L7 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.75■□□□□ 0.11
Casc4Q6P2L7 Gm7461-201ENSMUST00000058918 827 ntBASIC15.75■□□□□ 0.11
Casc4Q6P2L7 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Casc4Q6P2L7 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Casc4Q6P2L7 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Casc4Q6P2L7 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Casc4Q6P2L7 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Casc4Q6P2L7 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Casc4Q6P2L7 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Casc4Q6P2L7 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Casc4Q6P2L7 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Casc4Q6P2L7 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Casc4Q6P2L7 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.75■□□□□ 0.11
Casc4Q6P2L7 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Casc4Q6P2L7 Grk6-207ENSMUST00000225925 2769 ntBASIC15.75■□□□□ 0.11
Casc4Q6P2L7 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Casc4Q6P2L7 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Casc4Q6P2L7 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Casc4Q6P2L7 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Casc4Q6P2L7 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Casc4Q6P2L7 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.74■□□□□ 0.11
Casc4Q6P2L7 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.74■□□□□ 0.11
Casc4Q6P2L7 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Casc4Q6P2L7 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.74■□□□□ 0.11
Casc4Q6P2L7 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Casc4Q6P2L7 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.74■□□□□ 0.11
Casc4Q6P2L7 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.74■□□□□ 0.11
Casc4Q6P2L7 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Casc4Q6P2L7 Gm8655-201ENSMUST00000221159 852 ntBASIC15.74■□□□□ 0.11
Casc4Q6P2L7 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Casc4Q6P2L7 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Casc4Q6P2L7 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Casc4Q6P2L7 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Casc4Q6P2L7 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Casc4Q6P2L7 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Casc4Q6P2L7 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms