Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac4Q6NZM9 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac4Q6NZM9 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac4Q6NZM9 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac4Q6NZM9 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac4Q6NZM9 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac4Q6NZM9 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac4Q6NZM9 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac4Q6NZM9 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Hdac4Q6NZM9 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac4Q6NZM9 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac4Q6NZM9 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac4Q6NZM9 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac4Q6NZM9 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac4Q6NZM9 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac4Q6NZM9 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac4Q6NZM9 Gm9103-201ENSMUST00000119371 405 ntBASIC17.41■□□□□ 0.38
Hdac4Q6NZM9 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac4Q6NZM9 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.41■□□□□ 0.38
Hdac4Q6NZM9 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.41■□□□□ 0.38
Hdac4Q6NZM9 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.41■□□□□ 0.38
Hdac4Q6NZM9 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.41■□□□□ 0.38
Hdac4Q6NZM9 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.41■□□□□ 0.38
Hdac4Q6NZM9 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac4Q6NZM9 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.41■□□□□ 0.38
Hdac4Q6NZM9 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Hdac4Q6NZM9 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac4Q6NZM9 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac4Q6NZM9 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac4Q6NZM9 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
Hdac4Q6NZM9 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac4Q6NZM9 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac4Q6NZM9 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac4Q6NZM9 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac4Q6NZM9 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac4Q6NZM9 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac4Q6NZM9 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac4Q6NZM9 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.4■□□□□ 0.38
Hdac4Q6NZM9 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.4■□□□□ 0.38
Hdac4Q6NZM9 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac4Q6NZM9 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac4Q6NZM9 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Hdac4Q6NZM9 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac4Q6NZM9 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac4Q6NZM9 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac4Q6NZM9 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac4Q6NZM9 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac4Q6NZM9 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac4Q6NZM9 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Hdac4Q6NZM9 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac4Q6NZM9 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac4Q6NZM9 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac4Q6NZM9 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Hdac4Q6NZM9 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac4Q6NZM9 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac4Q6NZM9 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Hdac4Q6NZM9 Gm15358-201ENSMUST00000119249 520 ntBASIC17.39■□□□□ 0.37
Hdac4Q6NZM9 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
Hdac4Q6NZM9 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.39■□□□□ 0.37
Hdac4Q6NZM9 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.39■□□□□ 0.37
Hdac4Q6NZM9 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac4Q6NZM9 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac4Q6NZM9 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac4Q6NZM9 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac4Q6NZM9 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac4Q6NZM9 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Hdac4Q6NZM9 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac4Q6NZM9 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac4Q6NZM9 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac4Q6NZM9 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac4Q6NZM9 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac4Q6NZM9 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Hdac4Q6NZM9 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac4Q6NZM9 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac4Q6NZM9 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Hdac4Q6NZM9 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac4Q6NZM9 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac4Q6NZM9 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac4Q6NZM9 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac4Q6NZM9 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.38■□□□□ 0.37
Hdac4Q6NZM9 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac4Q6NZM9 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac4Q6NZM9 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.38■□□□□ 0.37
Hdac4Q6NZM9 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.38■□□□□ 0.37
Hdac4Q6NZM9 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac4Q6NZM9 Gm34391-201ENSMUST00000203706 907 ntBASIC17.38■□□□□ 0.37
Hdac4Q6NZM9 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac4Q6NZM9 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac4Q6NZM9 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Hdac4Q6NZM9 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac4Q6NZM9 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.38■□□□□ 0.37
Hdac4Q6NZM9 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.38■□□□□ 0.37
Hdac4Q6NZM9 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hdac4Q6NZM9 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
Hdac4Q6NZM9 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hdac4Q6NZM9 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hdac4Q6NZM9 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hdac4Q6NZM9 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hdac4Q6NZM9 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hdac4Q6NZM9 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms