Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf6Q6NVF9 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf6Q6NVF9 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf6Q6NVF9 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf6Q6NVF9 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf6Q6NVF9 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf6Q6NVF9 Asic1-205ENSMUST00000228185 1818 ntBASIC15.11■□□□□ 0.01
Cpsf6Q6NVF9 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf6Q6NVF9 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf6Q6NVF9 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf6Q6NVF9 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf6Q6NVF9 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf6Q6NVF9 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Cpsf6Q6NVF9 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf6Q6NVF9 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf6Q6NVF9 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Cpsf6Q6NVF9 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf6Q6NVF9 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.11■□□□□ 0.01
Cpsf6Q6NVF9 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.11■□□□□ 0.01
Cpsf6Q6NVF9 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf6Q6NVF9 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf6Q6NVF9 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf6Q6NVF9 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.11■□□□□ 0.01
Cpsf6Q6NVF9 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf6Q6NVF9 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf6Q6NVF9 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf6Q6NVF9 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Cpsf6Q6NVF9 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf6Q6NVF9 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf6Q6NVF9 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf6Q6NVF9 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf6Q6NVF9 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf6Q6NVF9 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Cpsf6Q6NVF9 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf6Q6NVF9 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf6Q6NVF9 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf6Q6NVF9 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf6Q6NVF9 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf6Q6NVF9 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.1■□□□□ 0.01
Cpsf6Q6NVF9 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf6Q6NVF9 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf6Q6NVF9 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf6Q6NVF9 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.1■□□□□ 0.01
Cpsf6Q6NVF9 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.1■□□□□ 0.01
Cpsf6Q6NVF9 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf6Q6NVF9 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf6Q6NVF9 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf6Q6NVF9 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.1■□□□□ 0.01
Cpsf6Q6NVF9 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf6Q6NVF9 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf6Q6NVF9 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf6Q6NVF9 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf6Q6NVF9 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf6Q6NVF9 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf6Q6NVF9 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf6Q6NVF9 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.1■□□□□ 0.01
Cpsf6Q6NVF9 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf6Q6NVF9 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf6Q6NVF9 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf6Q6NVF9 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf6Q6NVF9 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf6Q6NVF9 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf6Q6NVF9 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf6Q6NVF9 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf6Q6NVF9 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf6Q6NVF9 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf6Q6NVF9 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf6Q6NVF9 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.09■□□□□ 0.01
Cpsf6Q6NVF9 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Cpsf6Q6NVF9 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf6Q6NVF9 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf6Q6NVF9 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf6Q6NVF9 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.09■□□□□ 0.01
Cpsf6Q6NVF9 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.09■□□□□ 0.01
Cpsf6Q6NVF9 Gm14859-201ENSMUST00000117752 357 ntBASIC15.09■□□□□ 0.01
Cpsf6Q6NVF9 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.09■□□□□ 0.01
Cpsf6Q6NVF9 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.09■□□□□ 0.01
Cpsf6Q6NVF9 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.09■□□□□ 0.01
Cpsf6Q6NVF9 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.09■□□□□ 0.01
Cpsf6Q6NVF9 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Cpsf6Q6NVF9 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.09■□□□□ 0.01
Cpsf6Q6NVF9 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Cpsf6Q6NVF9 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Cpsf6Q6NVF9 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.09■□□□□ 0.01
Cpsf6Q6NVF9 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.09■□□□□ 0.01
Cpsf6Q6NVF9 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.09■□□□□ 0.01
Cpsf6Q6NVF9 Gm8825-201ENSMUST00000182565 998 ntBASIC15.09■□□□□ 0.01
Cpsf6Q6NVF9 Gm4518-201ENSMUST00000182638 718 ntBASIC15.09■□□□□ 0.01
Cpsf6Q6NVF9 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.09■□□□□ 0.01
Cpsf6Q6NVF9 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.09■□□□□ 0.01
Cpsf6Q6NVF9 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.09■□□□□ 0.01
Cpsf6Q6NVF9 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf6Q6NVF9 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.09■□□□□ 0.01
Cpsf6Q6NVF9 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf6Q6NVF9 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.09■□□□□ 0.01
Cpsf6Q6NVF9 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.09■□□□□ 0.01
Cpsf6Q6NVF9 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf6Q6NVF9 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf6Q6NVF9 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf6Q6NVF9 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms