Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpm4Q6IRU2 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpm4Q6IRU2 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpm4Q6IRU2 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpm4Q6IRU2 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpm4Q6IRU2 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Tpm4Q6IRU2 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpm4Q6IRU2 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpm4Q6IRU2 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Tpm4Q6IRU2 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpm4Q6IRU2 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.44■□□□□ 0.38
Tpm4Q6IRU2 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpm4Q6IRU2 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tpm4Q6IRU2 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tpm4Q6IRU2 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tpm4Q6IRU2 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tpm4Q6IRU2 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.43■□□□□ 0.38
Tpm4Q6IRU2 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Tpm4Q6IRU2 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Tpm4Q6IRU2 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Tpm4Q6IRU2 Mir6982-201ENSMUST00000184354 68 ntBASIC17.43■□□□□ 0.38
Tpm4Q6IRU2 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.43■□□□□ 0.38
Tpm4Q6IRU2 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tpm4Q6IRU2 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tpm4Q6IRU2 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tpm4Q6IRU2 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tpm4Q6IRU2 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tpm4Q6IRU2 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Tpm4Q6IRU2 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Tpm4Q6IRU2 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tpm4Q6IRU2 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tpm4Q6IRU2 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tpm4Q6IRU2 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Tpm4Q6IRU2 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tpm4Q6IRU2 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tpm4Q6IRU2 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tpm4Q6IRU2 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tpm4Q6IRU2 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tpm4Q6IRU2 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tpm4Q6IRU2 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tpm4Q6IRU2 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tpm4Q6IRU2 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tpm4Q6IRU2 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tpm4Q6IRU2 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Tpm4Q6IRU2 Gm37736-201ENSMUST00000193564 2802 ntBASIC17.42■□□□□ 0.38
Tpm4Q6IRU2 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tpm4Q6IRU2 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tpm4Q6IRU2 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.42■□□□□ 0.38
Tpm4Q6IRU2 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tpm4Q6IRU2 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tpm4Q6IRU2 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tpm4Q6IRU2 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tpm4Q6IRU2 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tpm4Q6IRU2 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.42■□□□□ 0.38
Tpm4Q6IRU2 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tpm4Q6IRU2 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tpm4Q6IRU2 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tpm4Q6IRU2 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tpm4Q6IRU2 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tpm4Q6IRU2 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tpm4Q6IRU2 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
Tpm4Q6IRU2 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tpm4Q6IRU2 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tpm4Q6IRU2 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tpm4Q6IRU2 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC17.41■□□□□ 0.38
Tpm4Q6IRU2 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tpm4Q6IRU2 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.41■□□□□ 0.38
Tpm4Q6IRU2 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Tpm4Q6IRU2 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.41■□□□□ 0.38
Tpm4Q6IRU2 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.41■□□□□ 0.38
Tpm4Q6IRU2 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.41■□□□□ 0.38
Tpm4Q6IRU2 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tpm4Q6IRU2 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tpm4Q6IRU2 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Tpm4Q6IRU2 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tpm4Q6IRU2 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.41■□□□□ 0.38
Tpm4Q6IRU2 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Tpm4Q6IRU2 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tpm4Q6IRU2 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tpm4Q6IRU2 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.41■□□□□ 0.38
Tpm4Q6IRU2 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tpm4Q6IRU2 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tpm4Q6IRU2 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Tpm4Q6IRU2 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tpm4Q6IRU2 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Tpm4Q6IRU2 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tpm4Q6IRU2 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tpm4Q6IRU2 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tpm4Q6IRU2 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Tpm4Q6IRU2 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tpm4Q6IRU2 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.4■□□□□ 0.38
Tpm4Q6IRU2 Gm10013-201ENSMUST00000106074 672 ntBASIC17.4■□□□□ 0.38
Tpm4Q6IRU2 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.4■□□□□ 0.38
Tpm4Q6IRU2 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.4■□□□□ 0.38
Tpm4Q6IRU2 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.4■□□□□ 0.38
Tpm4Q6IRU2 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.4■□□□□ 0.38
Tpm4Q6IRU2 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Tpm4Q6IRU2 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tpm4Q6IRU2 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
Tpm4Q6IRU2 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms