Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Prkcz2-201ENSMUST00000206136 1756 ntBASIC20.79■□□□□ 0.92
Gli3Q61602 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Gli3Q61602 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Gli3Q61602 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gli3Q61602 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gli3Q61602 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC20.78■□□□□ 0.92
Gli3Q61602 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gli3Q61602 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Gli3Q61602 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gli3Q61602 Ldha-ps-201ENSMUST00000119390 995 ntBASIC20.78■□□□□ 0.92
Gli3Q61602 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC20.78■□□□□ 0.92
Gli3Q61602 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC20.78■□□□□ 0.92
Gli3Q61602 Gm7390-201ENSMUST00000212452 1216 ntBASIC20.78■□□□□ 0.92
Gli3Q61602 Gm16476-201ENSMUST00000221544 139 ntBASIC20.78■□□□□ 0.92
Gli3Q61602 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gli3Q61602 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gli3Q61602 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Gli3Q61602 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.78■□□□□ 0.92
Gli3Q61602 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gli3Q61602 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gli3Q61602 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Gli3Q61602 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Gli3Q61602 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Gli3Q61602 Olfr582-201ENSMUST00000098212 960 ntBASIC20.77■□□□□ 0.92
Gli3Q61602 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Gli3Q61602 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gli3Q61602 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC20.77■□□□□ 0.92
Gli3Q61602 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gli3Q61602 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Gli3Q61602 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Gli3Q61602 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gli3Q61602 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Gli3Q61602 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Gli3Q61602 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gli3Q61602 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC20.76■□□□□ 0.91
Gli3Q61602 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC20.76■□□□□ 0.91
Gli3Q61602 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC20.76■□□□□ 0.91
Gli3Q61602 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gli3Q61602 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gli3Q61602 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gli3Q61602 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Gli3Q61602 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gli3Q61602 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Gli3Q61602 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Gli3Q61602 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Gli3Q61602 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC20.76■□□□□ 0.91
Gli3Q61602 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC20.76■□□□□ 0.91
Gli3Q61602 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC20.76■□□□□ 0.91
Gli3Q61602 AC159896.2-201ENSMUST00000214753 269 ntBASIC20.76■□□□□ 0.91
Gli3Q61602 AC154319.1-201ENSMUST00000216330 312 ntBASIC20.76■□□□□ 0.91
Gli3Q61602 AL589735.1-201ENSMUST00000224353 270 ntBASIC20.76■□□□□ 0.91
Gli3Q61602 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC20.76■□□□□ 0.91
Gli3Q61602 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gli3Q61602 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC20.76■□□□□ 0.91
Gli3Q61602 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Gli3Q61602 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gli3Q61602 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Gli3Q61602 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Gli3Q61602 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
Gli3Q61602 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gli3Q61602 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Gli3Q61602 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC20.75■□□□□ 0.91
Gli3Q61602 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gli3Q61602 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gli3Q61602 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gli3Q61602 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC20.75■□□□□ 0.91
Gli3Q61602 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Gli3Q61602 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC20.75■□□□□ 0.91
Gli3Q61602 Gm37424-201ENSMUST00000191727 561 ntBASIC20.75■□□□□ 0.91
Gli3Q61602 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Gli3Q61602 Gm5356-201ENSMUST00000093326 615 ntBASIC20.75■□□□□ 0.91
Gli3Q61602 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gli3Q61602 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gli3Q61602 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
Gli3Q61602 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gli3Q61602 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gli3Q61602 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gli3Q61602 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gli3Q61602 Gm14722-201ENSMUST00000118943 689 ntBASIC20.74■□□□□ 0.91
Gli3Q61602 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gli3Q61602 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC20.74■□□□□ 0.91
Gli3Q61602 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Gli3Q61602 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Gli3Q61602 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Gli3Q61602 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Gli3Q61602 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.74■□□□□ 0.91
Gli3Q61602 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gli3Q61602 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Gli3Q61602 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gli3Q61602 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gli3Q61602 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.73■□□□□ 0.91
Gli3Q61602 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gli3Q61602 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC20.73■□□□□ 0.91
Gli3Q61602 Gm7067-201ENSMUST00000207698 1249 ntBASIC20.73■□□□□ 0.91
Gli3Q61602 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gli3Q61602 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gli3Q61602 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC20.73■□□□□ 0.91
Gli3Q61602 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC20.73■□□□□ 0.91
Gli3Q61602 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gli3Q61602 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms