Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Foxc1Q61572 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Foxc1Q61572 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Foxc1Q61572 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Foxc1Q61572 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Foxc1Q61572 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Foxc1Q61572 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Foxc1Q61572 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Foxc1Q61572 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC11.46□□□□□ -0.58
Foxc1Q61572 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Foxc1Q61572 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Foxc1Q61572 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Foxc1Q61572 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Foxc1Q61572 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Foxc1Q61572 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Foxc1Q61572 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC11.45□□□□□ -0.58
Foxc1Q61572 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Foxc1Q61572 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Foxc1Q61572 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Foxc1Q61572 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Foxc1Q61572 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Foxc1Q61572 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Foxc1Q61572 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Foxc1Q61572 AC115863.1-201ENSMUST00000214815 1813 ntBASIC11.45□□□□□ -0.58
Foxc1Q61572 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Foxc1Q61572 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Foxc1Q61572 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Foxc1Q61572 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Foxc1Q61572 Gm12644-201ENSMUST00000119935 606 ntBASIC11.45□□□□□ -0.58
Foxc1Q61572 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC11.45□□□□□ -0.58
Foxc1Q61572 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Foxc1Q61572 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Foxc1Q61572 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Foxc1Q61572 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.45□□□□□ -0.58
Foxc1Q61572 Gm18195-201ENSMUST00000207604 706 ntBASIC11.45□□□□□ -0.58
Foxc1Q61572 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC11.45□□□□□ -0.58
Foxc1Q61572 AC159301.1-201ENSMUST00000225130 1182 ntBASIC11.45□□□□□ -0.58
Foxc1Q61572 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Foxc1Q61572 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Foxc1Q61572 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Foxc1Q61572 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Foxc1Q61572 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Foxc1Q61572 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Foxc1Q61572 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Foxc1Q61572 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Foxc1Q61572 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Foxc1Q61572 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Foxc1Q61572 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Foxc1Q61572 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Foxc1Q61572 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC11.45□□□□□ -0.58
Foxc1Q61572 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Foxc1Q61572 Gm6858-201ENSMUST00000208582 1468 ntBASIC11.44□□□□□ -0.58
Foxc1Q61572 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC11.44□□□□□ -0.58
Foxc1Q61572 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Foxc1Q61572 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Foxc1Q61572 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Foxc1Q61572 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Foxc1Q61572 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Foxc1Q61572 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Foxc1Q61572 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Foxc1Q61572 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Foxc1Q61572 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Foxc1Q61572 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Foxc1Q61572 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Foxc1Q61572 Gm15165-201ENSMUST00000118140 502 ntBASIC11.44□□□□□ -0.58
Foxc1Q61572 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Foxc1Q61572 Gm18733-201ENSMUST00000173950 856 ntBASIC11.44□□□□□ -0.58
Foxc1Q61572 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC11.44□□□□□ -0.58
Foxc1Q61572 Gm18351-201ENSMUST00000188646 883 ntBASIC11.44□□□□□ -0.58
Foxc1Q61572 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC11.44□□□□□ -0.58
Foxc1Q61572 Gm45696-201ENSMUST00000212088 985 ntBASIC11.44□□□□□ -0.58
Foxc1Q61572 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC11.44□□□□□ -0.58
Foxc1Q61572 Cmtm5-203ENSMUST00000227441 610 ntBASIC11.44□□□□□ -0.58
Foxc1Q61572 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Foxc1Q61572 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Foxc1Q61572 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Foxc1Q61572 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Foxc1Q61572 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Foxc1Q61572 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Foxc1Q61572 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Foxc1Q61572 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Foxc1Q61572 Gm19430-201ENSMUST00000193847 2137 ntBASIC11.44□□□□□ -0.58
Foxc1Q61572 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Foxc1Q61572 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Foxc1Q61572 Gm45605-201ENSMUST00000210265 4269 ntBASIC11.43□□□□□ -0.58
Foxc1Q61572 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Foxc1Q61572 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Foxc1Q61572 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Foxc1Q61572 AC132265.1-201ENSMUST00000219233 1665 ntBASIC11.43□□□□□ -0.58
Foxc1Q61572 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Foxc1Q61572 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Foxc1Q61572 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Foxc1Q61572 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Foxc1Q61572 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Foxc1Q61572 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC11.43□□□□□ -0.58
Foxc1Q61572 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Foxc1Q61572 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Foxc1Q61572 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC11.43□□□□□ -0.58
Foxc1Q61572 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Foxc1Q61572 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms