Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clns1aQ61189 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Clns1aQ61189 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clns1aQ61189 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clns1aQ61189 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.35□□□□□ -0.27
Clns1aQ61189 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clns1aQ61189 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Clns1aQ61189 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clns1aQ61189 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Clns1aQ61189 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clns1aQ61189 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clns1aQ61189 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Clns1aQ61189 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.34□□□□□ -0.27
Clns1aQ61189 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clns1aQ61189 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Clns1aQ61189 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clns1aQ61189 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clns1aQ61189 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.34□□□□□ -0.27
Clns1aQ61189 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clns1aQ61189 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clns1aQ61189 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC13.34□□□□□ -0.27
Clns1aQ61189 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clns1aQ61189 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC13.34□□□□□ -0.27
Clns1aQ61189 Gm16042-201ENSMUST00000204813 1247 ntBASIC13.34□□□□□ -0.27
Clns1aQ61189 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clns1aQ61189 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clns1aQ61189 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.34□□□□□ -0.27
Clns1aQ61189 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clns1aQ61189 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.34□□□□□ -0.27
Clns1aQ61189 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Clns1aQ61189 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Clns1aQ61189 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clns1aQ61189 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Clns1aQ61189 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clns1aQ61189 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clns1aQ61189 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Clns1aQ61189 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clns1aQ61189 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clns1aQ61189 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clns1aQ61189 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Clns1aQ61189 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.33□□□□□ -0.27
Clns1aQ61189 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Clns1aQ61189 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Clns1aQ61189 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Clns1aQ61189 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Clns1aQ61189 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clns1aQ61189 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clns1aQ61189 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clns1aQ61189 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clns1aQ61189 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clns1aQ61189 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Clns1aQ61189 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.33□□□□□ -0.28
Clns1aQ61189 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clns1aQ61189 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC13.33□□□□□ -0.28
Clns1aQ61189 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Clns1aQ61189 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.33□□□□□ -0.28
Clns1aQ61189 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC13.33□□□□□ -0.28
Clns1aQ61189 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC13.33□□□□□ -0.28
Clns1aQ61189 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clns1aQ61189 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Clns1aQ61189 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clns1aQ61189 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clns1aQ61189 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Clns1aQ61189 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clns1aQ61189 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clns1aQ61189 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Clns1aQ61189 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clns1aQ61189 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clns1aQ61189 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Clns1aQ61189 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Clns1aQ61189 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.33□□□□□ -0.28
Clns1aQ61189 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Clns1aQ61189 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clns1aQ61189 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.33□□□□□ -0.28
Clns1aQ61189 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clns1aQ61189 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC13.32□□□□□ -0.28
Clns1aQ61189 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Clns1aQ61189 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Clns1aQ61189 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clns1aQ61189 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clns1aQ61189 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clns1aQ61189 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Clns1aQ61189 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clns1aQ61189 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Clns1aQ61189 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Clns1aQ61189 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Clns1aQ61189 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Clns1aQ61189 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Clns1aQ61189 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clns1aQ61189 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Clns1aQ61189 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clns1aQ61189 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Clns1aQ61189 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clns1aQ61189 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Clns1aQ61189 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.32□□□□□ -0.28
Clns1aQ61189 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Clns1aQ61189 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clns1aQ61189 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Clns1aQ61189 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC13.32□□□□□ -0.28
Clns1aQ61189 Gm29707-201ENSMUST00000196325 491 ntBASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms